Pseudomonas knackmussii: PKB_4085
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Entry
PKB_4085 CDS
T03081
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00541
Biosynthesis of various nucleotide sugars
pkc01100
Metabolic pathways
pkc01250
Biosynthesis of nucleotide sugars
Module
pkc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PKB_4085 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pkc01005
]
PKB_4085 (hldD)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PKB_4085 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
pkc01005
]
Core region
PKB_4085 (hldD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
DUF6716
Motif
Other DBs
NCBI-ProteinID:
CDF85414
UniProt:
A0A024HL90
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All DBs
Position
complement(4292637..4293632)
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AA seq
331 aa
AA seq
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MSIIVTGAAGFIGSNLVKALNLRGETDIIAVDDLTEGDKFRNLADCEITDYLDKRDFVTR
YARGGFGVVRALFHQGACSSTMESDGRYMMDNNYRYSCDLLQASLTLGIPFLYASSAAVY
GGGRDFREMRDHEKPLNVYGYSKFLFDQRVRRVLPQVRTQVVGLRYFNVYGPREQHKGRM
ASVAYHCFRQFRERGKVQLFGEYGDYPAGGHLRDFVSVEDVARVNLHFLDNPHHSGIFNL
GSGRAQPFNDVALAVINSLRAQQDQQPLSLEQAIGQGLLEYVEFPDSLRGKYQCYTCADI
SFLRETGFRGPMLNVEEGVDRYCRWLLQEEA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcgtcaccggcgccgccggcttcattggcagcaacctggtcaaggcgctc
aacctgcgtggtgagaccgacatcatcgcggtggatgacctgaccgagggcgacaaattc
cgcaacctcgcggactgcgagatcaccgattacctggacaagcgcgacttcgtcacgcgc
tacgccaggggcggtttcggcgtggtccgcgcgctgttccaccagggcgcctgctccagc
accatggagagcgacgggcgctacatgatggacaacaactaccgctacagctgcgacctg
ctgcaggccagcctgacgctgggcatcccgttcctgtatgcctcatcggctgcggtctat
ggtggtgggcgcgacttccgcgaaatgcgcgatcacgagaagccgctgaacgtctacggc
tactccaagttcctcttcgaccagcgcgtacgccgcgtgctgccgcaggtgcgcacccag
gtggtcggcctgcgctacttcaacgtctacggcccgcgcgagcagcacaaggggcgcatg
gcctcggtggcctatcactgcttccggcagttccgcgagcggggcaaggtgcagcttttc
ggcgagtacggcgactatccggccggcggccatctgcgcgacttcgtgtcggtggaggat
gtcgcccgggtcaacctgcacttcctcgacaacccgcaccacagtggcatcttcaacctc
ggcagtggccgggcgcagccgttcaacgacgtggcgctggcggtcatcaacagcctgcgt
gcacagcaggaccaacagccgctgagcctcgaacaggccatcggccagggcctgctcgaa
tacgtcgagtttcccgacagcctgcgcggcaagtaccagtgctacacctgcgcggacatc
tccttcctgcgcgaaacgggcttccgcggaccgatgctgaacgtggaagagggcgtcgat
cgctattgccgctggctgcttcaagaggaggcctga
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