Pseudomonas knackmussii: PKB_4089
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Entry
PKB_4089 CDS
T03081
Name
(GenBank) putative transcriptional regulator
KO
K06075
MarR family transcriptional regulator, transcriptional regulator for hemolysin
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkc03000
]
PKB_4089
Transcription factors [BR:
pkc03000
]
Prokaryotic type
Helix-turn-helix
MarR family
PKB_4089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MarR_2
MarR
HTH_27
HVO_A0261_N
GntR
HTH_Crp_2
HTH_IclR
HTH_24
TrmB
Rrf2
HTH_36
B-block_TFIIIC
HxlR
Dimerisation
DnaD_N
DUF8612
Fe_dep_repress
HVO_A0114
LexA_DNA_bind
WHD_ArnR1
Motif
Other DBs
NCBI-ProteinID:
CDF85418
UniProt:
A0A024HLU7
LinkDB
All DBs
Position
complement(4296608..4297042)
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AA seq
144 aa
AA seq
DB search
MSDKDKHYFGTQLAQASRAWRAELDRRLSHLGLSQARWLVLLHLARNSGIPTQRELAQSV
GVEGPTLARLLDGLEAQGLVRRQAVAEDRRAKRICLTPKADVLIADIESIAASVRNDVLA
GIDEEDIAVCQKILSKILCNLEKN
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataaagataagcactacttcggtacccagttggctcaagcgtcccgtgcctgg
cgcgccgagctcgaccgtcgcctcagtcacctgggcctttcccaggcgcgctggctggtg
ctgctgcacctggcccgcaactccggtattcccacccagcgcgaactggcgcagtcggtc
ggcgtcgaaggcccgaccctggcgcgcctgctcgatggcctcgaagcccagggcctggtg
cgccgccaggcggtggcggaggatcgccgggcaaagcgcatctgcctgacgcccaaggcc
gatgtgcttatcgccgatatcgaaagcatcgccgccagcgtgcgcaacgacgtgctggct
gggatcgacgaagaggacattgcggtctgtcagaagatcctctcgaagatcctctgcaac
ctggaaaagaattga
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