Pseudomonas knackmussii: PKB_4183
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Entry
PKB_4183 CDS
T03081
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKB_4183 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_4183 (ung)
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PKB_4183 (ung)
DNA repair and recombination proteins [BR:
pkc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKB_4183 (ung)
Prokaryotic type
PKB_4183 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CDF85508
UniProt:
A0A024HM42
LinkDB
All DBs
Position
complement(4386558..4387256)
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AA seq
232 aa
AA seq
DB search
MTESDDRIKLEASWKEALRDEFDKPYMHELSEFLRSEKAAGKVIYPPGPLIFNALNSTPL
DRIKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELQRDLNIPIPAHGYLQHW
AEQGVLLLNTSLTVEQARAGSHANAGWQQFTDRVIQVVSERCDGLVFLLWGSHAQGKQKF
IDAQKHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQHGKAPIDWALPALG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagagcgacgatcgtatcaaactggaagcaagctggaaggaagccctgcgcgac
gaattcgacaagccctatatgcatgagctgagcgaattcctacgcagtgagaaagccgcc
ggcaaggtgatctacccgccggggccgctgatcttcaacgcgctcaactcgacgccgctg
gaccggatcaaggtggtgatcatcggccaggacccttaccacggaccgggccaggcccac
gggctgtgcttttcggtgcagccgggcgtgccgacgccgccgtcgttgcagaacatctat
aaggagctgcagcgcgacctgaacatccccatccccgcgcacggctacctgcagcactgg
gccgagcagggcgtgctgctgctcaacacctcgctgacggtcgagcaggcgcgcgccggc
tcgcacgccaatgccggctggcagcaattcaccgatcgggtgatccaggtggtcagcgaa
cggtgcgacgggctggtgttcctgctctggggctcgcatgcgcaaggcaagcagaagttc
atcgacgcgcagaagcacctgatcctcaagtcggcgcatccgtcgccgctttcggcctac
cgcgggttcctcggcaacggccatttcagccgcaccaacaagttcctcgaacagcacggc
aaggcgccaatcgactgggcgctgccggcactgggctga
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