KEGG   Pseudomonas knackmussii: PKB_4218
Entry
PKB_4218          CDS       T03081                                 
Symbol
ygdH
Name
(GenBank) LOG family protein ygdH
  KO
K06966  pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc00230  Purine metabolism
pkc00240  Pyrimidine metabolism
pkc01100  Metabolic pathways
pkc01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PKB_4218 (ygdH)
   00240 Pyrimidine metabolism
    PKB_4218 (ygdH)
Enzymes [BR:pkc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.10  pyrimidine-5'-nucleotide nucleosidase
     PKB_4218 (ygdH)
SSDB
Motif
Pfam: PpnN_C DUF4478 Lysine_decarbox LDcluster4
Other DBs
NCBI-ProteinID: CDF85543
UniProt: A0A024HM88
LinkDB
Position
4424443..4425825
AA seq 460 aa
MSHRPTINASVSPKGTLETLSQREVAQLSEAGSGNLYQLFRQCVLAILNTGARIDNAKTI
LDAYRDFEVRIHQQDRGVRLELLNAPADAFVDGEMIAGTREMLFSALRDIVYTASELENQ
RVDLNSSAGITDYVFHLLRNARTLRAGVEPKIVVCWGGHSISTEEYKYTKKVGHELGLRN
LDVCTGCGPGVMKGPMKGATIGHAKQRHHGGRYLGLTEPGIIAAEAPNPIVNELVILPDI
EKRLEAFVRVGHGIIIFPGGVGTAEEFLYLLGILMHPDNQELPFPLLLTGPKSAAPYFEQ
LHAFVGATLGEAAQRRYRILIDDPAEVAREMAKGLKEVKQFRRERNDAFHFNWLLKIDER
FQRPFDPTHENMAALQLTKDIPPHKLAANLRRAFSGIVAGNVKENGVRLIEEHGPYEIHG
DHQVMKPLDDLLQAFVKQHRMKLPGGAAYKPCYRVVGSGA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtcccacagacccaccatcaatgcctcggtcagccccaagggcaccctcgaaaccctg
tcccagcgcgaagtggcgcaactcagcgaagccggctcgggcaacctctaccagctcttc
cgccagtgcgtgctggcgatcctcaacaccggcgctcgtatcgacaacgccaagaccatc
ctcgacgcctaccgcgacttcgaggtccgcatccaccagcaggaccgtggcgtgcgcctg
gaactgctgaacgcgccggccgacgccttcgtcgatggcgagatgatcgccggcacccgc
gaaatgctcttcagcgcgctgcgcgacatcgtctacaccgccagcgagctggagaaccag
cgcgtcgacctgaacagctcggcgggcatcaccgactacgtcttccacctgctgcgcaac
gcccgcaccctgcgcgccggcgtcgagccgaagatcgtcgtgtgctggggcggccactcc
atcagcaccgaggaatacaagtacaccaagaaggtcggccacgagctgggcctgcgtaac
ctcgacgtctgcaccggttgcggccccggcgtgatgaagggcccgatgaagggcgccacc
atcggccacgccaagcagcgccaccacggtggccgctacctgggcctgaccgagccgggg
atcatcgccgccgaggcgccgaacccgatcgtcaatgaactggtgatcctgccggacatc
gagaagcgcctggaagccttcgtccgcgtcggccacggcatcatcatcttccccggcggc
gtgggcacggccgaggagttcctctacctgctgggcatcctcatgcacccggacaaccag
gagctgcccttcccgctgctgctcactgggccgaagagcgccgcgccctacttcgaacag
ctgcatgccttcgtcggcgccaccctcggcgaagccgcgcagcgtcgctaccgcatcctc
atcgacgatccggcggaagtggcgcgggaaatggcaaaggggctcaaggaggtcaagcag
ttccgccgcgagcgcaacgacgccttccacttcaactggctgctgaagatcgacgagcgc
ttccagcgtccgttcgacccgacccacgagaacatggccgcgctgcagctcacgaaagac
ataccgccgcacaagctggccgccaacctgcgccgggccttctccggcatagtcgcgggc
aacgtgaaggagaacggcgtgcgcctgatcgaggagcacggcccctacgagatccacggc
gaccaccaggtgatgaagccgctggacgacctgctgcaggccttcgtcaagcaacaccgc
atgaagctgcccggcggcgcggcctacaagccgtgctaccgggtggtcggcagcggcgcc
tga

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