Pseudomonas knackmussii: PKB_4277
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Entry
PKB_4277 CDS
T03081
Name
(GenBank) long-chain-fatty-acid--CoA ligase 6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00061
Fatty acid biosynthesis
pkc00071
Fatty acid degradation
pkc01100
Metabolic pathways
pkc01212
Fatty acid metabolism
pkc02024
Quorum sensing
pkc04146
Peroxisome
Module
pkc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PKB_4277
00071 Fatty acid degradation
PKB_4277
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PKB_4277
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKB_4277
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pkc01004
]
PKB_4277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkc04147
]
PKB_4277
Enzymes [BR:
pkc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PKB_4277
Lipid biosynthesis proteins [BR:
pkc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PKB_4277
Exosome [BR:
pkc04147
]
Exosomal proteins
Exosomal proteins of breast milk
PKB_4277
Exosomal proteins of breast cancer cells
PKB_4277
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CDF85602
UniProt:
A0A024HM76
LinkDB
All DBs
Position
complement(4489582..4491279)
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AA seq
565 aa
AA seq
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MQLKDFAKDKSPIEMLYHWEEQSPDAIYLRQPVMGKWREYSWAETGDHVRRMANALKTLR
LERGDKIAILSKNCAEWVITDLALQFAGLISVPLYVDQSTESLGYVLQHSEAKAIFVGKL
DEPVWKRLKSSIPQSVLKIGFSFHGADCDFQRGGEVDYLLPDLITNHEPLPGRPVPHDDD
IWTIIYTSGTTGLPKGAVHCYRAPRHVGHHALAVFGFSARDRTLSFLPLAHVAERLLVAS
NSLYAGMQINFTQSLKTFQADLCAVRPTFFFSVPRLWKKFQDNILERMPQSRLDKMLAVP
MLGTLVARQVRKALGLDCARIIVSGAASLSPALQQWYGRIGLHIAEGYGMTENFAYGFIG
RPGEHRPGTVGRAMPESGAKLSEEGEILFKCPTLMQCYYKEPEKSREALDDEGYYRTGDL
GQLDDDGYLRITGRIKELFKTEKGEYVAPAPIEAKLASFKGFEQICLIGSGLSQPVAIVT
LSQPFLRAKRCELSSEIGAFVEQINLQLLNHEKISGVVVSIRDWSPDSGLVTPTLKVKRN
IIEAQYAELAQRFADSHERVLWESI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaagatttcgccaaggacaagtcccctatcgaaatgctctaccactgggag
gagcaaagccccgatgccatctatctccgtcaacctgtaatgggaaagtggcgtgagtac
agttgggccgagactggtgatcatgttcggcgcatggcgaatgcactgaaaacgctgagg
ctggagcgcggcgacaagatcgcgatcctgtcgaagaactgtgcggaatgggtgataacc
gacctcgcgctgcagtttgccggtctgataagcgtgccgttgtatgtcgatcaatcgact
gaatcgcttggctatgtgttgcagcactcggaggcgaaggcgatcttcgtcggcaagttg
gatgaacccgtgtggaaacgcctgaaatccagcatcccccaatcggttttgaagattggc
ttctctttccacggcgccgactgcgacttccagcgcggcggcgaggtggactacctgcta
ccggacttgataaccaatcatgaaccgctgccgggtcgaccggtgccgcatgacgacgac
atctggaccatcatctacacctccggcacaacaggcctcccaaagggcgcggtgcactgt
taccgcgcaccacggcatgtaggccaccatgccctcgcggtatttggtttctcggcccgc
gaccgaaccctttcctttctgccacttgcgcatgtcgcagagcgtctacttgtggctagc
aacagcctgtatgcgggtatgcagatcaacttcacccagtccttgaagacatttcaagcc
gacctctgcgccgtgcgcccgaccttcttcttctcagtgcctcggttatggaaaaaattc
caggacaatatccttgagcgcatgccgcaatcccgcctggacaagatgctggctgtgccg
atgctcggcacactggtcgcacgccaggtgcgcaaggcgcttgggcttgattgtgcgcgg
atcatcgtctccggcgccgcctcgctgtcacccgcactgcagcagtggtatggccgtatt
ggccttcatatcgcggagggctatggcatgactgagaacttcgcctatggcttcatcgga
cgcccgggagaacatcgtcccggcaccgtcggcagggccatgccggaaagtggtgccaag
cttagcgaagaaggcgagatattgttcaagtgccccacgttgatgcagtgctattacaag
gaaccagaaaagagtcgtgaagccctcgatgacgagggctattaccgcaccggcgacctc
ggtcaactcgatgatgacggctacctgcgaatcactggacggatcaaggaactgttcaag
acagagaaaggcgaatatgtcgcccccgcgccaattgaggccaaactggcctccttcaag
gggtttgagcagatatgtctgattggttccgggctcagccagccggtagcaatagttacg
ctgtcacagccttttctacgcgccaagcgttgcgaacttagcagtgaaataggtgccttc
gttgagcagatcaacctgcagttgctcaaccacgaaaaaatctccggggtagtagtttcg
attcgcgactggtctccagattcagggctggtaacaccgacactcaaagtcaaacgcaac
attatcgaagctcagtacgctgaattggcacagcgatttgccgactcgcacgagcgtgtt
ctttgggaaagcatctga
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