Pseudomonas knackmussii: PKB_4781
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Entry
PKB_4781 CDS
T03081
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pkc03110
]
PKB_4781 (clpB)
Chaperones and folding catalysts [BR:
pkc03110
]
Heat shock proteins
HSP100
PKB_4781 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
ATPase_2
IstB_IS21
nSTAND3
AAA_18
AAA_14
AAA_24
Mg_chelatase
DUF815
AAA_7
bpMoxR
NBD_SMAX1
ABC_tran
DNA_pol3_delta2
AAA_19
NACHT
ATP_bind_1
GrpE
Torsin
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
CDF86101
UniProt:
A0A024HMP4
LinkDB
All DBs
Position
complement(5028692..5031256)
Genome browser
AA seq
854 aa
AA seq
DB search
MRIDRLTSKLQLALSDAQSLAVGHDHPAIEPVHLLSALLEQQGGSIKPLLMQVGFDIPAL
RSAMNKELDTLPKIQNPTGDVNLSQDLARLLNQADRLAQQKGDQFISSELVLLAALDDNS
KLGKLLLGQGVSKKALENAVNNLRGGEAVNDPNAEESRQALDKYTVDMTKRAEEGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLAL
DMGALIAGAKFRGEFEERLKAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH
HGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLI
QLKIEREALKKEDDEATKKRLAKLEEEITKLEREYADLEEIWKSEKAEVQGSAQIQQKIE
QARTELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKPENQLLRNKVTDEEIAEVV
SKWTGIPVSKMLEGEREKLLRMEDELHKRVIGQHEAVVAVANAVRRSRAGLADPNRPSGS
FLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNL
GSAQIQELVGDREAQHAAVMDAVNSHFRPEFINRIDEVVVFEPLAREQIAGIAEIQMGRL
RKRLAERELSLELSSEAMDKLIAVGFDPVYGARPLKRAIQRWIENPLAQLILAGKFLPGA
KIHAKVENDEIVFA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgaccgcttgaccagcaagctgcaactggcgctctccgatgcccagtccctg
gccgttggccacgatcacccggccatcgagccggtgcacctgctttccgccctgctcgag
cagcagggcggctccatcaagcccctgctgatgcaggtcggcttcgatatcccggccctg
cgcagcgcgatgaataaagagctggatacgctgccgaagatccagaaccccactggcgac
gtgaacctctcgcaggacctggcgcgcctgctcaaccaggccgaccgcctggcgcagcag
aagggtgaccagttcatctccagcgagctcgtgctgctcgccgccctggacgacaactcc
aagctcggcaagctgctgctcggccagggggtgtcgaagaaggctctggaaaacgccgtg
aacaacctgcgcggcggcgaggcggtcaacgaccccaatgccgaggaatcgcgccaggcg
ttggacaagtacaccgtcgacatgaccaagcgcgccgaagagggcaagctcgacccggtt
atcggccgtgacgacgagatccgccggaccatccaggtcctgcaacggcgcaccaagaac
aaccctgtgttgatcggtgagcccggcgtcggcaagaccgccattgtcgaaggcctggcc
cagcgcatcatcaacggcgaagtgcccgacggcctgaaggacaagcgcctgctggcgctg
gacatgggcgcgctgatcgccggcgccaagttccgcggcgagttcgaggagcgcctgaag
gcggtgctgaacgagctgtccaagcaggaaggtcggatcatcctgttcatcgacgaactg
cacaccatggttggcgccggcaaggccgaaggcgccatggacgccggcaacatgctcaag
ccggccctggctcggggcgagctgcattgcgtcggcgccacgaccctggacgagtaccgc
cagtacatcgagaaggatgcggcgctggagcggcgcttccagaaagtgctggtcgacgag
ccgagcgaggaagacaccatcgccatcctccgtggcctgaaagagcgctatgaagtgcac
cacggtgtgaccatcaccgacggcgccatcatcgccgcggccaagctgtcgcaccgctac
atcaccgatcgccagctgccggacaaggccatcgacctgatcgacgaggcggccagccgc
atccgcatggagatcgactccaagccggaagagctcgatcgcctggatcgccgcctgatc
cagctgaagatcgagcgcgaagcactgaagaaagaggacgacgaggccaccaagaagcgc
ctcgccaagctcgaagaagagatcaccaagctcgagcgcgaatacgccgacctggaagaa
atctggaagtcggagaaggccgaggtgcaaggctcggcgcagatccagcagaagatcgag
caggctcgaaccgaactcgaggcggcccgtcgcaagggcgacctcaaccgcatggccgag
ctgcagtacggggtgatcccggacctggagcgaagcctgcagatggtcgaccagcacggc
aagccggagaaccagctgctgcgcaacaaggtgaccgacgaggagatcgccgaggtcgtg
tccaagtggaccggcatcccggtgtcgaagatgctcgaaggcgagcgcgagaagctgctg
cgcatggaagacgagctgcacaagcgcgtcatcggccagcacgaggctgtagtcgccgtg
gcgaacgccgtgcgccgttcccgcgctggcctggccgacccgaaccggccgagcggttcc
ttcctcttcctcggcccgaccggggtgggcaagaccgagctgtgcaaggcgctggccgag
ttcctcttcgacaccgaagaggcgctggtgcgcatcgatatgtcggagttcatggagaag
cactcggtggctcgcctgatcggtgccccgccgggatacgtcggctatgaagagggcggc
tacctgaccgaggctgtgcgtcgcaagccgtactcggtggtgctgctggacgaggttgag
aaagcccatccggacgttttcaacattctcctgcaggtgctggaagatggccgtctgacc
gacagccacggccgtaccgtggacttccgcaacaccgtggtggtgatgacctccaacctc
ggttcggcgcagatccaggagctggtcggcgaccgcgaagcgcagcacgcggcggtgatg
gatgcggtgaactcgcacttccgcccggagttcatcaaccggatcgacgaggtggtggtg
ttcgagccgctggcccgcgagcagatcgccggtatcgccgagatccagatgggccgcctg
cgcaagcgcctggccgagcgcgagctgagcctggagctgagcagcgaggcgatggacaag
ctgatcgccgtcggcttcgacccggtgtatggcgcccgtccgctcaagcgcgcaatccag
cgctggatcgagaacccgctggcgcaactgatcctcgctggcaagttcctcccgggcgcg
aagatccacgcgaaggtggagaacgacgaaatcgtcttcgcctga
DBGET
integrated database retrieval system