Pseudomonas knackmussii: PKB_4787
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Entry
PKB_4787 CDS
T03081
Symbol
pilR
Name
(GenBank) Type 4 fimbriae expression regulatory protein pilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_4787 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkc02022
]
PKB_4787 (pilR)
02035 Bacterial motility proteins [BR:
pkc02035
]
PKB_4787 (pilR)
Two-component system [BR:
pkc02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PKB_4787 (pilR)
Bacterial motility proteins [BR:
pkc02035
]
Pilus system
Twitching motility proteins
PKB_4787 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_16
AAA_19
AAA_22
HTH_30
Pre_tape_measure
VpsR
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
CDF86107
UniProt:
A0A024HNN1
LinkDB
All DBs
Position
5036257..5037594
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AA seq
445 aa
AA seq
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MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNIKEAREYLAREPFDLCLTDMRLPDG
TGMDLVQHIQQRHPQVPVAMITAFGSLDTAVNALKAGAFDFVTKPVDLGRLRELVATALR
LRSPSAEEAPVDNRLLGESPPMKQMRNQIAKLARSQAPVYISGESGSGKELVARLIHEQG
PRSEVAFVPVNCGAIPSELMESEFFGHKKGSFTGAVEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEVSVDVRVLSATHKDLAAEVAAGRFRQDLYYRLNVIE
LRVPPLRERREDIPLLTDRVLQRLASDSGLAPAKVSADALEKLKSYRFPGNVRELENMLE
RAYTLCEDDLIQPHDLRFAETASGGESGEASLAQIDNLEDYLEEIERKLIMQALEETRWN
RTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcaaaaagccctgatcgtcgacgatgaaccggatatccgcgagctgctggag
atcaccctcggccgcatgaagctcgatacccgcagcgcccgcaacatcaaggaggcgcgc
gagtacctggcccgcgaacccttcgacctgtgcctgaccgacatgcgcctgcccgacggc
accggcatggacctggtgcagcacatccagcagcgccacccacaggtaccggtggccatg
attaccgcctttggcagcctggataccgcggtcaacgcgctcaaggccggcgccttcgac
ttcgtcaccaagccggtcgacctcggccgcctgcgcgaactggtcgccaccgcgttgcgc
ctgcgttcgccgagcgccgaagaagcaccggtggacaaccgcctgctcggcgagtcgccg
ccgatgaagcagatgcgcaaccagatcgccaagctcgcgcgcagccaggcgccggtgtac
atcagcggcgaatcgggtagcggcaaggagttggtggcacggctgatccacgaacaaggc
ccacgcagcgaagtggccttcgtcccggtcaactgcggcgccatcccgtcagagctgatg
gaaagcgagttcttcggccacaagaaaggcagcttcaccggcgccgtggaagacaagcag
ggcctgttccaggcggccaacggcggcaccctgttcctcgacgaagtcgccgacctgccg
ctgccgatgcaagtcaagctgctgcgcgccatccaggagaaggccgtacgcgcggtcggt
ggccagcaggaagtgtcggtcgacgtgcgcgtgctcagcgcgacacacaaggacctcgct
gcagaagtcgccgccgggcgcttccgccaggacctctactaccgcctgaacgtcatcgag
ctgcgcgtgccgccgctgcgcgagcgccgcgaggatattccgctgctcaccgatcgcgtg
ctgcagcgcctggccagcgatagcggcctggcgccggcgaaggtcagcgccgatgcgctg
gaaaagctgaagagctaccgtttccccggcaacgtacgcgaactggagaacatgctcgag
cgcgcctacacgctgtgcgaggacgacctcatccagccgcacgacctgcgcttcgcggaa
accgcgagtggcggcgaaagcggcgaagccagcctggcgcagatcgacaacctcgaagac
tacctggaagagatcgaacgcaagctgatcatgcaggcactcgaggaaacccgctggaac
cgcactgcggccgcccagcgtctgggcctgaccttccgctccatgcgctaccggctgaag
aagctcggtatcgattga
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