Pseudomonas knackmussii: PKB_4884
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Entry
PKB_4884 CDS
T03081
Symbol
acoR
Name
(GenBank) Acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkc03000
]
PKB_4884 (acoR)
Transcription factors [BR:
pkc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PKB_4884 (acoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_4
HTH_23
HTH_30
AAA_5
PAS_8
HTH_50
PAS_9
HTH_7
PAS_7
Diguanyl_cycl_sensor
HTH_32
AAA_2
PAS
HTH_22
HTH_AraC
AAA
Mga
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CDF86204
UniProt:
A0A024HNI1
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Position
complement(5139797..5141713)
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AA seq
638 aa
AA seq
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MSANAMSRHARQVMTVASGKLQQSGPGADPSIARSWLRCLEQYHLDPSRMLPPTVLEHTR
MLERREGLQQVLEIANGEMASLHQQLAGSGHAVLLTDSRGVILNRVCADADRDAFEHAGL
WLGADWSEASEGTNGIGTCLVERQALTIFRDEHFRSLHTGLTCSASPVFDPQGELLAVLD
VSSARPDLSRQSQFHTMALANLSAKMIESCYFRRRFEGQWLLRFHLQADYVGLFSEGLLA
FDGGGRILAVNQSALNLLDHPRDALLGRSVEDCFDLHLDDLLGRASAQPSASWPLRSHAG
RLFHALLRGEPRPLRVALPRESKVPAAPGLCLGDERLAADFRRALKVYAHDVPLLLHGET
GSGKEAFAKAVHLSGERAGKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRGKLL
QADGGTLFLDEIGDMPLTLQTRLLRVLEERQVVPLGDAVGQPVDLRLISATHRDLEALVA
AGSFREDLYYRLNGLVLQLPALREREDKAQLLAQLLTEESKGRHVLLDEDVRQALLDYPW
PGNVRQLRNVLRTLVALSEGGRVRLADLPVDIRRGPPAQVVARTEPVADSLQDAERAALI
AVLEAQRWHMSRTAQQLGISRNTLYRKLHRHGLSRSAP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaacgccatgagtcgccacgcccgccaggtcatgacagtggccagcggcaag
ctgcagcagagcggacccggagccgatccgtcgatcgcccgttcctggttgcgttgcctg
gagcaataccacctcgatccgtcgcggatgctgccgccgacggtgctcgaacatacgcgc
atgctcgaacggcgcgagggcctgcagcaggtgctggagatcgccaacggcgagatggcc
agcctgcaccagcagctcgccggctccggccacgcggtgctgctcaccgattcgcgcggg
gtgatcctcaaccgcgtctgcgccgacgccgaccgcgatgccttcgagcacgccgggctg
tggctcggcgccgactggagcgaggccagcgagggcaccaatggcatcggcacctgcctg
gtcgagcgccaggcgctgaccatcttccgcgacgagcacttccgcagcctgcacaccggg
ctgacctgctcggcaagcccggtgttcgacccgcaaggcgagctgctggcagtgctcgac
gtgtcctcggcgcgccccgatctgtcgcggcagagccagttccacaccatggccctggcc
aacctctcggcgaagatgatcgagagctgctacttccggcgccgcttcgaagggcaatgg
ctgctgcgtttccacctgcaggcggattacgtcggcctgttcagcgaagggctgctggcc
ttcgacggcggcgggcgcatcctcgccgtgaaccagagtgcgctcaacctgctcgatcac
ccgcgcgacgcgctgctcgggcgttcggtggaagactgcttcgacctgcacctggacgac
ctgctcggccgcgccagcgcgcaaccgtccgccagctggccgctgcgcagccacgccggg
cggctgttccatgccttgttgcgcggcgaaccgcgtccgcttcgcgtggccttgccgcga
gagtcgaaggtgccggcagcgccggggctgtgcctcggcgacgagcgcctggctgccgat
ttccgccgcgcgctgaaggtctacgcgcatgacgtgccgcttttgctgcacggcgaaacc
gggtcgggcaaggaggctttcgccaaggccgtgcacctgtccggcgagcgtgccggcaag
gccttcgtcgcgctgaactgcgcggccattccggagagcctgatcgagagcgagctgttc
ggttatcgcggcggcagcttcaccggtgcacgcaaggaaggcatgcgcggcaagctgctg
caagccgacggcggcacgctgttcctcgacgagatcggcgacatgccgctgaccctgcag
acccgcctgctgcgcgtgctcgaagaacgccaggtggtgccgctgggcgatgccgtgggg
cagccggtcgacctgcgcctgatcagcgccacgcaccgcgacctggaggcgctggtggcc
gccggcagcttccgcgaagacctctactaccgcctcaacggcctggtgctgcaattgccg
gcgctgcgtgagcgcgaggacaaggcgcagttgctggcgcagctgctgaccgaggaatcc
aagggccggcacgtcctgctcgacgaagacgtgcgccaggcactgctcgactatccctgg
ccgggcaacgtacgccagctgcgcaatgtgctgcgtactttggtcgcgctcagtgaaggc
gggcgggtgcgcctggccgatctgcctgtggatatccggcggggtccgccggcgcaggtg
gtggcacgtacggaaccggtcgccgacagcctgcaggatgccgagcgcgcggccctgatc
gcagtgctggaagcgcagcgctggcacatgagccgcaccgcgcagcagctgggcatcagc
cgcaataccctctaccgcaagttgcaccgtcacggcctgagccggtcggcgccttaa
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