KEGG   Pseudomonas knackmussii: PKB_4945
Entry
PKB_4945          CDS       T03081                                 
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PKB_4945 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkc03019]
    PKB_4945 (pcnB)
Enzymes [BR:pkc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     PKB_4945 (pcnB)
Messenger RNA biogenesis [BR:pkc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PKB_4945 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd Gad2 DUF1648
Other DBs
NCBI-ProteinID: CDF86260
UniProt: A0A024HMH6
LinkDB
Position
5208265..5209662
AA seq 465 aa
MLKKLIQSIRSPLRLKRTVRTTPEIVGSNQHSLRREQFSRNAVNVVERLQRAGYQAYIVG
GGVRDQLLGIAPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPQEEGDGDSNQASRNEAGRILRDNVYGTLEDDAQRRDFTINALYFDVSDERILDYAHGV
HDIRNRLVRLIGDPEQRYLEDPVRMLRAARFAAKLDFEIEKHSAAPIRKLAPMLREIPSA
RLFDEVLKLFLSGRGERTFELLVEYELFAPLFPASAKALARDPEYAGKLIRQALANTDER
IRQGKPVTPAFLFAALLWPALPARVAHHQDRGVPPIPAMQEAAHELISEQCQRTAVPKRF
TIPIREIWDMQERLPRRQGKRADLLLENPRFRAGYDFLLLRESAGEETGGLGDWWTDYQD
ASDGERRGMIRGLASSQEDGAAPRKRRRGGSRKRRPRTGEGAGNE
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgctgaaaaagctgatccagtccatccgctcacccctgcgcctcaagcgcaccgtccgc
accacgccggaaatcgtcggcagcaaccagcattcgctgcgccgcgaacagttcagccgg
aacgcggtcaacgtggtcgagcgcctgcagcgggcgggataccaggcctatatcgtcggc
ggcggggtgcgcgaccagctgctcggcatcgccccgaaagacttcgacgtcgccaccagc
gccacccccgagcaggtacgcgcggaattccgcaacgcgcgggtgatcggccgccgcttc
aaactggtccacgtacatttcggccgcgagatcatcgaggtcgccaccttccgcgccaat
catccgcaggaagaaggcgacggtgacagcaaccaggcgtcgcgcaacgaggcgggtcgc
atcctccgcgacaacgtctacggcaccctggaagacgatgcccagcgccgcgacttcacc
atcaatgccctgtatttcgacgtcagcgacgagcgcatcctcgattacgcccacggcgtg
cacgacatccgcaatcgcttggtccgcctgatcggcgatcccgaacagcgttacctcgaa
gacccggtgcgtatgctccgcgccgcgcgtttcgccgccaagctggacttcgagatcgag
aaacacagcgccgcgccgatccgcaagctggcgcccatgctgcgcgagattccttccgcg
cgactgttcgacgaagtgctcaagctgttcctgagcggccgtggcgagcgcaccttcgag
ctgctggtcgagtacgagctgttcgccccgctgttcccggccagtgcgaaggccctggcc
cgcgatccggaatacgccggcaagctgatccgccaggcactggcgaacaccgacgagcgc
atccgccagggcaaaccggtaacgccggcgttcctcttcgccgcgctgctctggccggca
ctgccggcgcgcgtggcccatcatcaggatcgcggtgtgccgccgattccggcgatgcag
gaagccgcccacgagctgatcagcgagcagtgccagcgcactgccgtgcccaagcgtttc
accatcccgatccgcgaaatctgggacatgcaggagcgcctgccgcgccgtcagggcaag
cgtgccgacctgctgctggaaaaccctcgcttccgcgccggctacgacttcctcctgctg
cgcgagagcgccggcgaggaaaccggtggcctgggcgactggtggaccgattaccaggac
gccagcgacggcgagcgccgcggcatgattcgcggcctggccagcagccaggaagatggc
gcagccccgcgcaagcgccgtcgtggcggtagccgcaagcgccgtccgcgcaccggcgaa
ggcgctggcaacgagtga

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