Pseudomonas knackmussii: PKB_4977
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Entry
PKB_4977 CDS
T03081
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkc03009
]
PKB_4977 (rlmE)
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
PKB_4977 (rlmE)
Ribosome biogenesis [BR:
pkc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PKB_4977 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-ProteinID:
CDF86290
UniProt:
A0A024HMK6
LinkDB
All DBs
Position
complement(5243789..5244412)
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AA seq
207 aa
AA seq
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MARSKTSHRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPG
GWSQVTSRVIGDKGILIASDILPMDSIPDVTFIQGDFTEDEVFAQLLEAIGENPVDLVIS
DMAPNMSGLPAVDMPRAMFLCELALDLCTRVLRPGGDFLIKIFQGEGFDTYLKMVRENFE
KVQMRKPLSSRDRSREQYLLARGFRGA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgttccaagactagccatcgctggctaaaagaacatttcgacgatccttacgtg
aagatggcgcaacgcgacggctaccgctcgcgcgccagctacaagctgctggaaatccag
gagaaggatcgcatcctgcgcccgggaatgaccgtggtcgacctcggcgcggcgccaggc
ggctggtcgcaggtcaccagtcgggtcatcggcgacaagggcatcctgatcgcttccgat
atcctgccgatggacagcattccggacgtcaccttcatccagggcgacttcaccgaagac
gaggtcttcgcccagttgctcgaggccatcggagaaaatccggtagaccttgtgatttcc
gatatggcccccaatatgagtgggctgcccgctgtggacatgccccgtgcgatgttcctc
tgcgagctggcactggacctctgcacccgggtgttgcgcccgggcggcgattttctgatc
aagatattccagggtgaagggttcgacacttacctgaagatggttcgcgagaatttcgag
aaggtacagatgcgcaagcccctgtcctcccgcgaccgctcccgtgagcaatatctgctc
gcacgcggattccgcggagcctag
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