Pseudomonas knackmussii: PKB_5078
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Entry
PKB_5078 CDS
T03081
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PKB_5078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_5078
Transporters [BR:
pkc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
PKB_5078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Exotox-A_bind
DUF4806
Motif
Other DBs
NCBI-ProteinID:
CDF86391
UniProt:
A0A024HND7
LinkDB
All DBs
Position
complement(5340910..5341962)
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AA seq
350 aa
AA seq
DB search
MKLQALRHGLAGFTLAVLAVGIAHADEPKQLFFYNWTDYYPVELLGKFEKETGIKVTMDG
YDSNETLLAKLQAGGAAYDVIVPSHSIMQTLIKQNLLLEIDSPKLANFQFVKPAFRDPAF
DPGRKFSAPYLWGTTGFSYDSARVPGGKLDDSWKEFFEPRPELNGEVAALDTPSSLINAA
AHYLNVDECTENPQDAKKILDLLQKQKPHLKMYSSDNTVDRMASGEVVMMQNWNGSTARA
TAQKSTIKYVYPREGVASFQDNFAVPKSAPHPENAKIFINWMMKPENAAAVTNAIAYSNG
IDSDKLLDAKWKVMDAINMPPEYASRLRLEKECSNKARELQDRIWSKLKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcaagccctgcgtcacggcctcgccggtttcaccctcgctgtgctggccgtc
ggcattgcccatgccgacgagcccaagcagctgttcttctacaactggaccgactactac
ccggtggagctgctcggcaagttcgagaaggaaaccggcatcaaggtcaccatggatggc
tacgacagcaacgagacgctgctcgccaagctgcaggccggcggcgccgcctacgacgtg
atcgtgccctcgcactcgatcatgcagacgctgatcaagcagaacctgctgctggagatc
gactcgccgaaactggccaacttccagttcgtcaaaccggccttccgcgacccggccttc
gaccccggccgcaagttctccgcgccctacctgtggggcaccaccggcttctcctacgac
agcgcgcgggtgcccggcggcaagctcgacgactcctggaaggagttcttcgagccacgc
ccggagctcaacggcgaggtcgccgcgctcgataccccgagcagcctgatcaacgccgcc
gcgcactacctgaacgtcgacgagtgcaccgagaacccgcaggacgccaagaagatcctc
gacctgctgcagaagcagaagccgcacctgaagatgtacagctcggacaacaccgtcgac
cgcatggcctccggcgaagtggtgatgatgcagaactggaacggctccaccgcccgcgcc
acggcgcagaagagcaccatcaagtacgtctacccgcgcgaaggcgtggcctcgttccag
gacaacttcgctgtgccgaaaagcgcgccgcacccggagaacgccaagatcttcatcaac
tggatgatgaagccggagaacgccgccgcggtgaccaacgccatcgcctattccaacgga
atcgacagcgacaagctgctcgacgccaagtggaaggtgatggacgcgatcaacatgccg
cccgagtacgcctcgcgcctgcgcctggagaaggaatgcagcaacaaggcgcgcgagctg
caggaccgcatctggtccaagctcaagggctga
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