Pseudomonas knackmussii: PKB_5228
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Entry
PKB_5228 CDS
T03081
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pkc02044
]
PKB_5228
02035 Bacterial motility proteins [BR:
pkc02035
]
PKB_5228
Secretion system [BR:
pkc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PKB_5228
Bacterial motility proteins [BR:
pkc02035
]
Pilus system
Pilus assembly proteins
PKB_5228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
CDF86541
UniProt:
A0A024HNV8
LinkDB
All DBs
Position
complement(5486047..5488002)
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AA seq
651 aa
AA seq
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MKHPFAGASALVFCLVFQVQAEVSQLPLCLASVSAPAVEAGSHGYVASFDSADWSGDLTR
YRLQPNGQREALWSARARLEAQGMVRRVLMHRDGELVDFRWANLDASQQAALDRPPEGEP
DGLGRERLAFLRGERGEEERLFRQRSSVLGDIVNSTPLLIGPPSRNARALDRLEGDLQAQ
RYSAFKAAQGQRPSVLYVGANDGMLHAFAVDSGDELFAFVPSAVIGELNQLADPGYVGDR
HRYFVDGPLVAEDVYIDGDWHTVLVGSLGGGGRGFFALDVSDPRSPRLLWEIDASERFAE
LGFGLPRPSLVRLSDGRWVVLAANGYGSRNDRALLYLIDIGSGRLLQALAANDHSGVPNG
LSSPRAVDIDGDGIADYAYAGDLLGNLWRFDLAAGTEGARTAFAGRPLFAARDAAERPQP
ISAAPRVIRHPTGEGLLVLFGTGKFFEEADARPAVGRPMSLYGIWDRHTAGEAALGTPRI
TRTDLQRQVLGAEDAAGRRSLSRHPVVWRVEKDPEARVKQWGWYVDLPEAGERSIADPVS
SGQLALFTTLAPNADPCSGVVSRLLAVDPRTGGAPQVDALDANHDGSIDEADRREGEVVA
SLRLVVGDSGLSYAFDLASGLGIALGRSETVRFFDGVRPGRQSWRVLEGGL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccctttcgcgggcgcgtcagcgctcgtcttttgcctggtcttccaggtgcag
gcggaggtcagccaattgcccttgtgccttgcctccgtatcagcgcctgcggttgaggcc
ggttcccatggctacgtcgcgagcttcgacagcgcggactggagcggcgatctcacgcgc
taccggctgcaaccgaacggccagcgtgaagcgctgtggagcgccagggcgcggctcgaa
gcgcagggcatggtgcgccgtgtgctgatgcatcgagatggcgaactggtcgatttccgt
tgggccaatctcgatgcgtcgcagcaggcggcgcttgatcgtcctccggagggggagccg
gatgggctggggcgcgaacgcctggcgttcctgcgcggtgagcgtggagaggaagaacga
ctctttcgtcagcgcagttcggtgctcggcgacatcgtcaattcgactccgttgctgatc
ggtccgccgtcgcgcaatgcacgggcgctcgaccgcctcgagggcgacctgcaggcgcag
cgctacagtgcgttcaaggctgcccaggggcagcgcccgagcgtcctgtacgtcggcgcc
aacgacggcatgctgcacgcctttgcggttgacagtggcgacgagctcttcgccttcgtg
cccagcgctgtcatcggcgagctcaaccagttggccgatccgggatacgtcggcgaccgg
catcgctacttcgtcgacgggccgctggtggccgaggatgtctacatcgacggtgactgg
cacaccgtgctggtcggcagccttggcggcggggggcgagggttctttgcgctggacgtg
agcgatccgcggagcccgcggttgctctgggagatcgacgccagcgaacgcttcgccgag
ctcggtttcggcttgccgcgtccgagcctggtacggctgagcgatgggcgctgggtagtg
ctggcagcgaacggctatggcagccggaacgacagggcgctgctctatctgatcgacatc
ggcagcggccgcctgctgcaggccctggctgcgaacgaccacagcggcgtgcccaacggg
ctttccagcccacgagccgtggatatcgatggcgatggcatcgccgactacgcctatgcc
ggggacctgctcggcaatctctggcgcttcgacctggctgccggtaccgaaggggcacgc
accgcattcgccgggcgcccgctgttcgcggcccgcgatgctgccgagcgtccacagccg
atcagcgccgcgccgcgagtgatccgccatcccaccggtgagggcctgctggtgctgttt
ggcaccggcaagttcttcgaggaagccgacgctcgacctgcggttggcaggccaatgagc
ctctacggcatctgggatcggcatacggcgggcgaggccgcactcggcacgccgcgcatc
acccgcaccgatctgcagcgacaggtgctcggggccgaggacgcagcggggcgccgaagc
ctcagccgtcatccggtggtctggcgagtggagaaggaccccgaggcgcgggtgaagcaa
tggggctggtatgtcgatttgccggaggcgggcgagcggtcgatcgccgacccggtcagc
agcggccaactggcgctgttcaccaccctggcgccgaatgccgatccctgtagcggagtg
gtcagccgcctgctggccgtcgatccgcgcaccggtggggcgccgcaggtcgatgcgctc
gatgcaaaccatgacgggagcatcgacgaggccgaccgtcgcgagggcgaagtcgtggcc
agcttgcgactcgtcgtcggcgacagtggcttgtcgtacgcattcgatctggccagtggc
ctgggcattgccctgggccgcagcgagacagtgcgcttctttgacggcgtgcggcccggc
cggcagagctggcgcgtactggagggcggcctgtga
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