Pseudomonas knackmussii: PKB_5287
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Entry
PKB_5287 CDS
T03081
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00730
Thiamine metabolism
pkc01100
Metabolic pathways
pkc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PKB_5287 (thiC)
Enzymes [BR:
pkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PKB_5287 (thiC)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CDF86599
UniProt:
A0A024HPR8
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All DBs
Position
complement(5559365..5561245)
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AA seq
626 aa
AA seq
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MSKPNTTVTRLEQLDRQSTQPFPNSRKVYLSGSRPDIRVPVREISLADTPTAFGGEKNAP
VYVYDTSGPYTDPDVRIDLRKGLPDVRSRWIDERGDTEILPGLTSEFGQARLADASLDAL
RFNHVRTPRRAKSGRNVTQMHYAKQGIITPEMEYIAIRENLKLQEARAAGLLKDQHPGHS
FGASIPQEITAEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSI
EEEVEKLTWGIRWGADTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVGGIAED
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQE
NFLYTHFEEICEIMKAYDVSFSLGDGLRPGSVADANDAAQFGELETLGELTKIAWKHDVQ
VMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYG
CAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRW
EDQFNLGLDPDTARAYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYARENGLGDE
QQAIEAGFQEQAARFKDEGSVIYKQV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgaacaccaccgttacccgcctcgagcagctcgaccgccagtcgacgcag
ccgtttcccaattcgcgcaaggtctacctgagcggttcgcgcccggacatccgcgtgccg
gtgcgggaaatctcgttagccgacaccccgaccgcattcggcggcgagaagaacgccccg
gtgtacgtctacgacacctccggcccctacaccgacccggatgtacgcatcgacctgcgc
aagggcctgcccgacgtgcgctcgcgctggatcgacgagcgcggtgacaccgaaatcctt
cccggcctgacctccgaattcggccaggcacgcctggccgacgccagcctcgacgccctg
cgcttcaaccacgtgcgcaccccgcgccgggccaagtccgggcgcaacgtcacgcagatg
cactacgccaagcagggcatcatcacgccggagatggagtacatcgccatccgcgagaac
ctgaagctgcaggaagcccgcgccgccggcctgctcaaggaccagcatcccggccacagc
ttcggcgccagcattccgcaggagatcaccgccgagttcgtccgtgaggagatcgcccgc
ggccgcgcgatcatcccggcgaacatcaaccacaccgaactcgagccgatgatcatcggc
cgcaacttcctggtgaagatcaacggcaatatcggcaacagcgcgctgggttcgtcgatc
gaggaagaggtcgagaagctcacctggggcatccgctggggcgccgacaccgtgatggac
ctgtccaccggcaagcacatccacgagacccgcgagtggatcctgcgcaacagcccggtg
ccgatcggcacggtgccgatctaccaggcgctggagaaggtcggcggcatcgccgaggac
ctgacctgggaaatcttccgcgacaccctgatcgaacaggccgagcagggcgtcgactac
ttcaccatccacgctggcgtgctgctgcgctacgtgccgctgaccgccaagcgcgtcacc
ggcatcgtctcgcgcggcggctcgatcatggccaagtggtgcctggcgcatcaccaggag
aacttcctctatacccacttcgaggaaatctgcgaaatcatgaaggcctacgacgtcagc
ttctcgctgggcgacggcctgcgcccgggctcggtggccgacgccaacgacgccgcgcag
ttcggcgaactggaaaccctcggcgagctgaccaagatcgcctggaagcacgacgtgcag
gtgatgatcgaaggccccggccacgtgcccatgcagctcatcaaggagaacatggacaag
cagctggagtgctgcgacgaggcgccgttctacaccctcggcccgctgaccaccgacatc
gccccgggctacgaccacatcacctcgggcatcggtgccgcgatgatcggctggtacggc
tgcgccatgctttgctacgtcacgcccaaggagcacctgggcctgccgaacaaggatgac
gtgaagaccgggatcatcacctacaagatcgccgcgcacgccgccgacctcgccaagggt
cacccgggcgcgcagattcgcgacaacgcgctgtcgaaggcgcgcttcgagttccgctgg
gaagaccagttcaacctcggcctcgacccggacacggcgcgtgcctatcacgacgagaca
ctgccgaaggattcggccaaggtcgcgcacttctgctccatgtgcgggccgaagttctgc
tcgatgaagatcacccaggaagtccgcgactacgctcgcgagaatggcctgggcgatgaa
cagcaggccatcgaagccggcttccaggaacaggccgcgcgcttcaaggacgagggatcg
gtgatctacaagcaggtctga
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