Pseudomonas knackmussii: PKB_5290
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Entry
PKB_5290 CDS
T03081
Name
(GenBank) putative extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKB_5290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_5290
Transporters [BR:
pkc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PKB_5290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
CDF86602
UniProt:
A0A024HQ22
LinkDB
All DBs
Position
complement(5564153..5565196)
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AA seq
347 aa
AA seq
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MISRKFAMQPLLLLLGLGLASAQAQDSMVVVGYGGAGQKAQDAAFFQPFAKASGAKLTQA
EYNGEMARIKVMVDTGHTDWDVVQIEGPDLARNCDLGMFEPLDWKAVGGSDQLIPNSAKE
CGSAALVWGVAIAYDADKLKTAPTGWNDFWDLQKFPGKRGLRKRAEYNLEFALMADGVKA
ADVYQVLSTKAGVDRAFAKLDQIKPSIQWWEAGAQPPQWLAAGDVTMTTAYTGRIADAHK
AGRNLDLVWPGSLYGMDYWAIIKGSQHADLAKRFIAFANQADAQVDYVRNIPYGPTNKQA
AERLPADVAHWVPTAPANLAVGLAMNDEFWADHGEELEERFNAWAAQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcgcaagttcgctatgcaacctttgctgctgcttctggggctcggcctggcc
agcgcccaggcgcaggacagcatggtcgtggtcggttacggcggtgccgggcagaaagcc
caggacgccgcgttcttccagcctttcgccaaggccagcggggccaagctgacccaggcc
gagtacaacggcgagatggcgcgcatcaaggtgatggtcgacaccggccacaccgactgg
gacgtggtgcagatcgaggggccggacctggcgcgcaactgcgacctgggcatgttcgag
ccgctggactggaaggccgtcggcggctccgaccaactgattcccaactcggccaaggag
tgcggttcggcggcattggtgtggggcgtggccatcgcctacgacgccgacaagctgaag
accgcgccgaccggctggaacgatttctgggacctgcagaaattccccggcaagcgcggc
ctgcgcaagcgcgccgagtacaacctggagttcgccctgatggccgacggggtcaaggca
gcggacgtctaccaggtgctctcgaccaaggccggggtcgaccgcgccttcgccaagctc
gaccagatcaagccgtcgatccagtggtgggaagccggcgcgcaaccgccgcagtggctg
gccgccggcgacgtgaccatgaccaccgcctacaccgggcgcatcgccgacgcgcacaag
gccgggcgcaacctcgacctggtctggccgggcagcctctacggcatggactactgggcg
atcatcaagggctcgcagcacgccgacctggccaagcgcttcatcgccttcgccaaccag
gccgatgcgcaggtcgactacgtgcgcaacatcccctatggtccgaccaacaagcaggcc
gccgagcgcttgcctgcagacgtcgcccactgggtgccgaccgcgccggccaacctggcg
gtaggcctggcgatgaacgatgagttctgggccgaccatggcgaggagctggaagagcgc
ttcaacgcctgggccgcgcagtaa
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