Pseudomonas knackmussii: PKB_5315
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Entry
PKB_5315 CDS
T03081
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein rfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00540
Lipopolysaccharide biosynthesis
pkc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PKB_5315 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pkc01005
]
PKB_5315 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
pkc01005
]
Core region
PKB_5315 (rfaG)
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Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Glycogen_syn
Motif
Other DBs
NCBI-ProteinID:
CDF86627
UniProt:
A0A024HQ35
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Position
complement(5593240..5594361)
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AA seq
373 aa
AA seq
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MNLAFVLYKYFPFGGLQRDFMRIALECQKRGHAIRVYTPIWEGKVPAGFDVRVAPIKALF
NHRRNEKFSAWLDADLARDPVDRVIGFNKMPGLDVYYAADGCFEDKAQTLRNPIYRRWGR
YKHFADYERAVFSPQSKTEILMISEVQQPLFVKHYGTPAGRFHLLPPGIAQDRRAPANAA
EIRADFRREFKLGDDDLLLVQIGSGFKTKGLDRSLKALASLPRELRKRTRLIAIGQDDPK
PFLLQVKALGLSDNVQILKGRSDIPRFLLGADLLIHPAYNENTGTVLLEALVAGLPVLVT
DVCGYAHYIAEADAGRVVPSPFEQDNLNRMLVQMLGDAEARAAWSRNGLAFADTADLYSM
PQHAADVILAERP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggctttcgttctctacaaatacttcccgttcggcgggctgcagcgcgacttc
atgcgcattgcgctggagtgccagaagcgcggacacgcgattcgcgtctacacgccgatc
tgggagggcaaagtgcccgctggtttcgacgtgcgcgtcgcgccgatcaaggcgctgttc
aaccatcgccgcaacgagaagttcagcgcctggctggacgccgacctcgcgcgcgatccg
gtcgaccgggtgatcggtttcaacaagatgccggggctggacgtgtactacgccgccgac
ggctgcttcgaggacaaggcgcagacgctgcgcaacccgatctatcgccgctggggccgc
tacaagcacttcgccgactacgagcgcgcagtgttctcgccgcagtccaagaccgagatc
ctgatgatctccgaggtccagcagccgctgttcgtcaagcactacggcaccccggccggg
cgcttccacctgctgccgccgggcatcgcccaggaccgccgcgcaccggccaatgccgcc
gagatccgcgccgatttccgccgcgagttcaagctgggcgacgacgacctgctgctggtg
cagatcggctccggcttcaagaccaagggcctggaccgcagcctcaaggcgctggcatcg
ctgccgcgcgagctgcgcaagcgcacccgcctgatcgccatcggccaggacgatcccaag
ccgttcctgctgcaggtgaaggctctcggcctgtcggacaacgtgcagatcctcaagggg
cgcagcgacatcccgcgcttcctgctcggcgccgacctgctgatccacccggcctacaac
gagaacaccggcaccgtgctgctggaggcgctggtcgccggcctgccggtgctggtcacc
gacgtctgcggctacgcccactacatcgccgaggccgatgccggccgcgtggtgccttcg
cctttcgagcaggacaacctgaaccgcatgctggtgcagatgctcggggatgctgaggcc
cgtgccgcctggtcgcgcaacggcctggccttcgccgacacggcggacctgtattccatg
ccgcagcacgcggcagacgtgattctcgcggagcgcccatga
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