Pseudomonas knackmussii: PKB_5501
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Entry
PKB_5501 CDS
T03081
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00521
Streptomycin biosynthesis
pkc00523
Polyketide sugar unit biosynthesis
pkc00541
Biosynthesis of various nucleotide sugars
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01250
Biosynthesis of nucleotide sugars
Module
pkc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PKB_5501 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PKB_5501 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PKB_5501 (rmlC)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PKB_5501 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
CDF86811
UniProt:
A0A024HPL3
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All DBs
Position
5809850..5810395
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AA seq
181 aa
AA seq
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MKATRLAIPDVVLLEPQVFGDERGFFFESFNQRKFEAAVGPVRPFVQDNHSRSARGVLRG
LHYQIQQPQGKLVRVVQGEVFDVAVDLRRDSPTFGQWVGAILSGENKHQLWIPEGFAHGF
QVLSESAEFLYKTTDFWAPEHERCIAWNDPDLAIEWPAPGEPELSGKDRLGVRLSEAEVF
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctacacgtctcgcaattcccgatgtcgtcttgctggaaccgcaggtcttcggc
gatgaacgcggcttcttcttcgaaagcttcaaccagcgcaaattcgaggccgccgttggt
ccggtacgccccttcgtccaggacaaccactcacgctccgcgcgcggcgtactgcgcggc
ttgcattaccagatccagcagccgcagggaaaactcgtgcgggtggtccagggcgaggtt
ttcgacgttgccgtcgatctgcggagagactcacctaccttcggccaatgggtcggcgcg
atcctgagtggcgagaacaaacatcagctgtggattcccgaaggcttcgcgcatggattc
caggtgctcagcgagagcgccgagtttctctacaagaccaccgacttctgggcaccggag
catgagcgctgcattgcctggaatgacccggatcttgccattgagtggccggcgccaggg
gagccggaactgtctggcaaggatcgcctgggcgtacgcctgagcgaagctgaagtattc
aactga
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