Pseudomonas knackmussii: PKB_5654
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Entry
PKB_5654 CDS
T03081
Symbol
dppa5
Name
(GenBank) Periplasmic dipeptide transport protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02010
ABC transporters
pkc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PKB_5654 (dppa5)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PKB_5654 (dppa5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_5654 (dppa5)
Transporters [BR:
pkc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PKB_5654 (dppa5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDF86964
UniProt:
A0A024HQJ4
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Position
5978605..5980176
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AA seq
523 aa
AA seq
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MRLLPLALLLAPALAGASTLSVCTEASPDGFDVVQFNALTTTNASADVLMNRLVEFDASQ
AKVVPSLAQSWTVSADGLTYDFRLREGVKFHSTDYFKPSRALDADDVLFSFQRMLDPANP
WHKVAQSGFPHAQSMQLPSLIKGLEKVGEHQVRFTLSHPDATFLAMLSMGFASIYSAEYA
DQLMKAGTPEKLNSQPIGSGPFVLRSFQKDAVIRYAANSDYFGGKPAVDNLLFAITPDAN
VRLQRLKRGECQIALSPKPLDVEEAAKDPALRIERTPAFMTAFVALNTQHPPLDKPEVRQ
AINLAFDRQSYLKSVFGDSATPATGVYPPNTWSYAKDISAYPHDLDKARQLLTQAGLKDG
FKTTIWTRPSGSLLNPNPSVGAQVLQADLAKVGIQAQIQVIEWGELIRRAKAGEHDLLFM
GWAGDNGDPDNFLTPQFSCASVKSGLNFARFCDAKLDGLISQGKALSEQEKRSALYEDAQ
RIIHDQALWLPLAHPTATTLLRKEVKGYAVSPFGRQDFSKVSF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttcccctcgccctccttcttgcccccgccctggccggcgccagcacgctc
agcgtgtgcaccgaagccagtccggacgggttcgacgtggtccagttcaacgccctgacc
accaccaacgcctcggccgacgtgctgatgaaccgcctggtggagttcgacgcgagccag
gccaaagtcgtgccgagcctggcgcagagctggacggtttcggcggacggcctgacctat
gacttccggctgcgcgaaggcgtgaagttccacagcaccgactacttcaagcccagccgt
gcgctggacgccgacgacgtgctgttcagcttccagcgcatgctcgatccggccaacccc
tggcacaaggtggcgcagagcggcttcccccatgcccagtcgatgcagctgccgagcctg
ataaaaggcctcgagaaggtcggcgagcaccaggtgcgcttcaccctcagccaccccgac
gccaccttcctggcgatgctcagcatgggcttcgcctccatttattctgcggagtacgcc
gatcagctgatgaaggccggcaccccggagaagctcaacagccagccgatcggcagcgga
cccttcgtcctgcgcagtttccagaaagatgccgtgatccgttacgcggccaactccgac
tattttggcggcaagccggctgtggataacctgctgttcgccatcaccccggacgccaac
gtgcgcctgcagcgcctcaaacgcggcgagtgccagatcgccctgtctccaaaaccgctg
gatgtcgaggaagcagccaaggacccggccctgcgcatcgagcgcacgcctgccttcatg
accgccttcgtcgccctaaatacccaacacccgcccctggacaagcccgaagtacgccag
gcgatcaacctcgccttcgatcgccagagctacctgaagtcggtatttggcgacagcgcc
acgccggccacgggcgtctacccgccgaacacctggagctacgcgaaggacatctcggcc
tacccgcatgatctggacaaagcccgccaactgctcacccaggcgggcctgaaggacggg
ttcaagaccaccatctggacccgccccagcggcagcctgctaaaccccaaccccagcgtg
ggggctcaagtgctacaggccgacctggccaaagtcggcatccaggcacagatccaggtc
atcgaatggggggagctgatccgccgcgccaaggccggcgagcacgacctgctgttcatg
ggctgggcaggcgacaacggtgatccggacaacttcctgactccgcaattctcctgcgcc
agcgtgaagtccggactgaatttcgcgcgcttctgcgatgccaagctggacggcctgatc
agccagggcaaggcgctgagcgagcaggaaaagcgcagcgccctctacgaggacgcccag
cgcatcatccacgaccaggcgctgtggctgccgctggcgcaccccacggcgaccacgctg
ctgcgcaaagaggtcaagggttacgcggtgagccccttcggtcgccaggacttctccaag
gtcagcttctaa
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