Pseudomonas knackmussii: PKB_5685
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Entry
PKB_5685 CDS
T03081
Symbol
glcD
Name
(GenBank) Glycolate oxidase subunit glcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00630
Glyoxylate and dicarboxylate metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKB_5685 (glcD)
Enzymes [BR:
pkc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
PKB_5685 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
CDF86995
UniProt:
A0A024HPL7
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Position
complement(6007839..6009338)
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AA seq
499 aa
AA seq
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MNILYDERLDGALPKVDKPALLVELRAALPDLEILHEPEDLRPYECDGLSAYRCTPLLVV
LPEHVEQVQTLLRLCHRMRVPVIARGAGTGLSGGALPLEQGVLLVMARFKRILEVNPAGR
YARVQPGVRNLAISQAAAPYGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLL
KVEIVTMDGERLTLGSDALDSPGFDLLALFTGSEGLLGVVVEVTVKLLPKPQMAKVLMAS
FDDVEKAGRAVADIIAAGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAAAILLCELDGVES
DVHEDCLCVEGVLRKAGATDVRLARDEEERARFWAGRKNAFPAVGRISPDYYCMDGTIPR
RELPRVLRGIAELSAEYGLRVANVFHAGDGNMHPLILFDANLPGELERAEALGGRILELC
VAVGGSITGEHGVGREKINQMCAQFNADELTLFHAVKAAFDPQGLLNPGKNIPTLHRCAE
FGAMHIHRGQLPFPDLERF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcctttacgatgagcgcctcgatggcgcactgcccaaggtggacaagcccgcg
ctactcgtcgagctgcgcgccgcgctgccggatctggaaatcctccacgagccggaggac
ctgcgcccctacgaatgcgatggcctctccgcctaccgctgcacgccgttgctggtggtg
ctgcccgaacacgtcgagcaggtgcagaccctgctgcgcctgtgccaccggatgcgcgtg
cctgtgatcgcgcgcggcgccggtaccggcctgtccggtggtgcgctgccgctggagcag
ggcgtgctgctggtgatggcgcgcttcaagcgcatcctcgaagtgaacccggccgggcgc
tacgcccgcgtgcagcccggcgtgcgcaacctggccatttcccaggctgccgcgccttac
ggcctgtactacgcgcccgatccgtcctcgcagatcgcctgttcgattggcggcaatgtc
gccgagaacgccggcggcgtgcattgcctgaagtacgggctgacggtgcacaacctgctc
aaggtcgagatcgtcaccatggacggcgagcgcctgacgctcggctccgacgctctcgac
agccctggcttcgatttgctggcgctgttcaccggttccgaaggcctgctcggcgtggtg
gtcgaggtaaccgtgaagctgctgcccaagccgcagatggccaaggtgttgatggcaagc
ttcgatgacgtcgagaaggctggccgcgcggtggccgacatcatcgccgccggcatcatc
cccggcggcctggagatgatggacaacctgtcgatccgcgccgccgaggacttcatccac
gccggttacccggtggacgccgcggccatccttctgtgcgagctggatggcgtggagtcc
gacgtccacgaggattgcctctgcgtcgaaggcgtgctgcgcaaggccggcgctacagac
gtgcggctggcgcgggacgaagaagagcgggcgaggttctgggctggtcgcaagaacgcc
ttcccggcggtagggcgcatctcgccggactactactgcatggatggcaccatcccgcgc
cgcgaactgcctcgcgtgctgcgcggcattgccgagctgtccgccgaatacggcctgcgc
gtggccaatgtgttccacgccggcgatggcaacatgcacccgctgattctcttcgacgcc
aacctgcctggcgagctggagcgcgccgaggcgctgggtgggaggatcctcgaactctgc
gtggcggtgggcggcagcatcaccggcgaacatggcgtggggcgcgagaagatcaaccag
atgtgcgcgcagttcaacgctgatgagctgaccctgttccatgcggtaaaggctgccttc
gatccgcagggtttgctcaaccctggcaagaacattcccacgctgcaccgctgcgccgag
ttcggcgccatgcacatccaccgtgggcagttgccgtttccggacctggagcgcttctga
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