Paracoccus kondratievae: F8A10_00145
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Entry
F8A10_00145 CDS
T06245
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pkd
Paracoccus kondratievae
Pathway
pkd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F8A10_00145 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkd03021
]
F8A10_00145 (rho)
03019 Messenger RNA biogenesis [BR:
pkd03019
]
F8A10_00145 (rho)
Transcription machinery [BR:
pkd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F8A10_00145 (rho)
Messenger RNA biogenesis [BR:
pkd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F8A10_00145 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_22
OB_RNB
ATPase_2
AAA_25
AAA
Fungal_virus_P2_C
Spore_III_AA
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QFQ85964
LinkDB
All DBs
Position
1:27146..28417
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AA seq
423 aa
AA seq
DB search
MTEERLNLFDLKAKSPADLLAMAEEWEIENASTMRKGEMMFSLLKEHAEEGYEIGGDGVL
EVVQDGFGFLRSPEANYLPGPDDIYVSPDMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VERINFEDPDKARHKVAFDNLTPLYPNERLKMEIEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDPKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKTNGEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgcctcaatctgttcgatctcaaggccaagagccccgctgacctgctg
gccatggccgaggaatgggaaatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgttgctgaaagaacatgccgaagaaggctatgaaatcggcggtgacggcgttctt
gaggtggtgcaggacggttttggcttcctgcgctcgcccgaggcgaactatctgcccggt
cctgatgatatctatgtcagccccgacatgatccgccagcacagcctgcgcaccggtgac
acggtcgaaggcgtgatccgtgcgcccggcgagaatgagcgttatttcgccctgacaaaa
gtagaacggatcaattttgaggatcctgacaaagcccgtcataaggtcgcctttgacaac
ctgaccccgctttaccccaatgagcggctgaagatggagatcgaagacccgactatcaaa
gaccgttcggcccggatcattgatctggtggcgccgattggtaaggggcagcgttcgctg
atcgttgcaccgccgcgcaccggtaagacggtcctgttgcaaaatattgcgcattcgatc
gaaaagaaccatcccgagtgctatctgatcgtcctgttgatcgacgagcgcccggaagag
gtgaccgatatgcagcgttcggttaagggtgaggtgatctcctcgacctttgacgaaccg
gccagccgtcacgttgccgtttcggaaatggtgatcgaaaaggccaagcgtctggtcgag
cataagcgagatgttgtcatcctgcttgactcgatcacaagacttggtagggcgttcaac
accgtcgtgcccagctcgggtaaagttctgaccggcggtgtcgatgcgaatgcgcttcag
cgtccaaaacgcttctttggcgcggcgcggaatatcgaagagggcggttcgctgaccatc
atcgcgacagccctgatcgacaccggttcgcgcatggacgaggtgatctttgaagaattc
aaaggcactggcaacagcgagatcgttctggatcgtaaagtcgctgacaagcgtgtcttc
ccggcgatggacatccttaagtccggcacccgtaaagaggaactgctggtcgatcccaaa
gatctgcagaaaacctatctgctgcggcgtatcctgaacccgatgggcacaacggatgcg
atcgagttcctgatctcgaagctgaagcagaccaagaccaatggcgagttcttcgattca
atgaacgcctga
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