Paracoccus kondratievae: F8A10_05710
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Entry
F8A10_05710 CDS
T06245
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pkd
Paracoccus kondratievae
Pathway
pkd00300
Lysine biosynthesis
pkd00470
D-Amino acid metabolism
pkd01100
Metabolic pathways
pkd01110
Biosynthesis of secondary metabolites
pkd01120
Microbial metabolism in diverse environments
pkd01230
Biosynthesis of amino acids
Module
pkd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F8A10_05710
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F8A10_05710
Enzymes [BR:
pkd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F8A10_05710
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
TMEM219
Motif
Other DBs
NCBI-ProteinID:
QFQ86965
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All DBs
Position
1:complement(1129933..1131192)
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AA seq
419 aa
AA seq
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MSNPLSEPGTATLDRHLAEAAERYGTPAYVYATDVITARLAHLRAHLGRWFSISFAVKSN
PNPALLGWMRDQVDLLDVSSGGEFALGRQTGWQPGLISFTGPAKREAELRAAISGGVGEL
VLESLREARLADAIAAELGRVQPVMIRLAPARVPKGFGDQMAGRPSPFGIDVENAPTELP
QIATLPNLRIIGLHIYSGTQSLKSEAICENWRIFMQVFSEICVSLDLRPGKLIFGSGLGI
PYHPGESELDLAAIAAGVGPDLDAFLADPRFADTRLVLELGRYLVGPAGWFLARVVSVKQ
SRGSRIAICDGGLNANLAASGNFGMVLRRNYVIHRVGGDEGGTRPDEPQDISGPLCTSID
KLGSRVLLPRLDEGDLIAIHGCGAYGPTASPLYFISHPLPAEVLLTGEQLCDATPDRGR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcccttgagtgagcccgggaccgccacgctggaccgccatctggccgaggcg
gcagaacgctatggtacccccgcctatgtctatgcgaccgatgtgatcacggcgcggctg
gcgcatctgcgtgcgcacctcggtcgctggttcagcatcagctttgcggtcaaaagcaat
ccgaacccggcgcttctgggttggatgcgggatcaggtagacctgcttgacgtctcgtcg
ggcggagagttcgcgcttggccgtcaaacaggctggcaacctgggctgatcagttttacc
ggtcccgccaaacgcgaggccgaattgcgcgcagccatctcgggtggtgttggagagctg
gtgctggaaagcctgcgcgaggcccggcttgccgatgccattgcggccgagcttgggcgc
gttcagccggtcatgatccggcttgcccctgcgcgggtgcccaagggatttggcgaccag
atggccggccgtcccagccccttcggcattgatgtcgagaacgcgccgaccgaactgccc
cagatcgccaccttgcccaacctgcgtattatcggactgcatatctattccggcacgcaa
tcgctgaaatccgaggcgatctgcgagaactggcgcatctttatgcaggtattctctgaa
atctgtgtatcgctggacctgcggccgggaaagctgatcttcggttcgggcttgggcatt
ccctatcacccgggcgaaagtgagcttgatcttgccgccatcgccgccggggtcgggcct
gatctggatgccttccttgcagatccgcgctttgctgacacccggctggtgctggaactt
ggccgctatctggtcggcccggcgggctggtttctggcccgcgtcgtctcggtcaagcaa
tcgcgcggcagccgtattgccatctgtgatgggggtctgaacgcgaaccttgcagcctcg
ggcaatttcgggatggtgctgcggcgcaattacgtcatccaccgtgtcggcggcgatgaa
ggcggtacccgaccagacgagccgcaggatatttccggcccgctctgcacctcgatcgac
aagctgggtagccgggtgctgttgccgcggcttgatgagggcgatctgatcgccattcac
ggctgtggagcttatgggccgacggccagcccgctttatttcatcagccaccccctgccc
gccgaggtcctgttgaccggagagcagctttgtgacgcgacccctgatcggggccgttaa
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