Paracoccus kondratievae: F8A10_08540
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Entry
F8A10_08540 CDS
T06245
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pkd
Paracoccus kondratievae
Pathway
pkd00521
Streptomycin biosynthesis
pkd00523
Polyketide sugar unit biosynthesis
pkd00525
Acarbose and validamycin biosynthesis
pkd00541
Biosynthesis of various nucleotide sugars
pkd01100
Metabolic pathways
pkd01110
Biosynthesis of secondary metabolites
pkd01250
Biosynthesis of nucleotide sugars
Module
pkd_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F8A10_08540 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F8A10_08540 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
F8A10_08540 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F8A10_08540 (rfbB)
00525 Acarbose and validamycin biosynthesis
F8A10_08540 (rfbB)
Enzymes [BR:
pkd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
F8A10_08540 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
Sacchrp_dh_NADP
adh_short_C2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QFQ87470
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All DBs
Position
1:complement(1692671..1693708)
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AA seq
345 aa
AA seq
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MKILVTGGAGFIGSAVVRLAVARGHEVVNLDALTYAANLANVASVADSPLYRFEQADIRD
RAALDRILSTHKPDAIMHLAAESHVDRSIDGPGAFIETNVTGTYNLLEAARAYWTTQGRP
EGFRFHHISTDEVFGSLGETGQFTETTPYDPRSPYSASKAASDHLVRAWHETYGLPVVLT
NCSNNYGPFHFPEKLVPVVILNALHGRPIPVYGDGGNVRDWLYVEDHADALLLALEKGSL
GRSYNIGGENEARNIDLVRTICAHMDHLRPESAPHDRLITFVADRPGHDRRYAIDPTRIR
TELGWRPSVTVEEGLRRTVEWYLNNEDWWRPLLSRQGVGERLGKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggtgaccggtggcgcggggttcatcggttcggcagtggtgcggctggcg
gtggcgcgcgggcatgaggtagtgaacctagatgcgctgacctatgcggctaatctggcg
aatgtggcctcggtcgcggacagcccgctttatcgtttcgaacaggccgatattcgcgac
cgggcggcgcttgatcgcatcctctcgacccataagcccgatgcgatcatgcacctggct
gctgaaagccatgtggatcgctcgatcgacgggccgggcgcattcatcgaaacgaacgtg
accggaacctataacctgcttgaggcggcgcgtgcctactggaccacgcagggccggccc
gaggggttccgtttccaccatatctcgaccgatgaggtctttggctctttgggcgagact
ggccagttcaccgagactacgccctatgacccgcgcagcccctattcggcctcgaaagcc
gcatccgatcatctggtccgcgcctggcacgagacctatggcctgccggtggtgctgacc
aattgttcaaacaattacgggcctttccattttccggaaaagctggtgccagtggtgatc
ctgaacgctctgcatggccgaccgatcccagtctatggtgatggaggcaacgtgcgcgac
tggctttatgtcgaggatcacgccgacgcgttgctgcttgccttggaaaagggcagcctg
ggccgcagctataacatcggtggcgagaatgaggcgcgtaatatagatctggtgcggacc
atttgcgcccatatggaccatctgcgcccagaatccgcgccgcatgaccggctgatcacc
tttgttgccgaccggccaggtcacgaccgccgctatgcgatcgacccgacccgcatccgt
accgaactgggttggcgcccctcggtcacggtcgaagaggggctcaggcgtactgtcgaa
tggtacctgaacaacgaagactggtggcgcccgttgctgagccgtcagggcgttggcgaa
aggcttggcaaggcatga
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