Paracoccus kondratievae: F8A10_09455
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Entry
F8A10_09455 CDS
T06245
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkd
Paracoccus kondratievae
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkd03032
]
F8A10_09455 (topA)
03400 DNA repair and recombination proteins [BR:
pkd03400
]
F8A10_09455 (topA)
Enzymes [BR:
pkd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F8A10_09455 (topA)
DNA replication proteins [BR:
pkd03032
]
Prokaryotic type
DNA Topoisomerases
F8A10_09455 (topA)
DNA repair and recombination proteins [BR:
pkd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F8A10_09455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QFQ87637
LinkDB
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Position
1:complement(1885581..1888136)
Genome browser
AA seq
851 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDPEADFAMKWEVAAESRK
HVKAIKDALASDPTLILATDPDREGEAISWHLLETLAPALKKGAEVSRVTFNAITKSAVT
EAMANPRQIDQPLVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVALRIIVDRE
MEIEAFKAREYWTVHARLATPRGDEFDANLTVFGGRKLERFDLATEEQAKLAVTAITSRD
LKVLSVAAKPASRNPWPPFMTSTLQQEASRKLGLGARACMSAAQRLYEAGYITYMRTDGI
DMAPEAVMAARDAIRARFGAEYLPKLPRMYKNKAKNAQEAHECIRPTDMMLSPDRLPVSD
KDQKALYDLIWKRTLASQMESARMERTTVEIGSADGQVGLRATGQVMLFDGFLKIYDQGR
DDEEDEDGRRLPLIHEGETPEKRSVTPEQHFTQPPPRYTEATLVKRMEELGIGRPSTYAS
IIGTIQERDYVRKEQNRLIPEDKGRLVTIFLQKYFPRYVSYDFTANLEGELDDISSGERA
YREVLRRFWRDFTAALESTADLRIGEVLEAIDDALAPHLYPPRPDGSDPRECPLCHKGRL
HLKTARSGGAFIGCSNYPECRFTRPISSPEGEVMGDTVLGVDNGDEISLKNGRFGPYVQR
GEATAENPKPPRASIPKGWDTGSVDLERALALLALPREIGPHPEDGVLVEAGIGRYGPYV
KHGATYANLPDVDEVFTIGMNRAVEVLASKRGRGRAAPAAPLAELGEHPQGGPVQVLDGR
YGPYVKWGKVNATLPRDLAPGDVTLERALELISEKAAKSGKKPARKAAAKKPAAAKKPAA
KKTASKAKKAE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtcgtcgttgaatctccggccaaggccaaaacgatcaacaaatatctgggc
gacgactataccgttctggcctcgttcggtcatgtgcgcgacctgccgcccaaggatggc
agcgtcgatcccgaggcggatttcgccatgaaatgggaggtcgcggccgaatcgagaaag
cacgtcaaggcgatcaaggacgcgctggcttcggacccgaccctgatccttgccaccgac
cctgaccgcgaaggcgaggcgatttcctggcacctgcttgaaacccttgccccggcgctg
aagaaaggggccgaggtcagccgtgtcacctttaacgcgatcaccaaatccgcagtgacc
gaggccatggcgaacccccgccagatcgaccagccgctggtcgatgcctatctggcgcgg
cgggcgctggattaccttgtcggtttcaacctgtctccggtcctgtggcgcaagctgccg
ggtgcgaaatcggcaggccgggtgcaatcggtcgccctgcgcatcatcgttgaccgcgag
atggagatcgaggccttcaaggcccgggaatactggaccgtccacgcccggcttgcgacg
ccgcgtggcgatgaattcgatgccaacctgacagtttttggcggcaggaagcttgagcgt
ttcgacctggcgaccgaagagcaggcgaaattggctgtcactgccatcacctcgcgcgat
ctcaaggtgctcagcgttgcggccaagcctgccagccgcaatccgtggccgcccttcatg
acctcgaccctgcagcaagaggccagccgcaagctgggtcttggcgcgcgggcttgcatg
tccgcggcgcagcgcctctatgaggcgggctatatcacctatatgcgaaccgacggcatc
gacatggcgcccgaggcggtgatggcggcgcgtgatgcgatcagggcgcggttcggcgcc
gagtacctgccgaaattgccgcgcatgtacaagaacaaggccaagaacgcgcaagaggcg
catgaatgtatccgtccgaccgacatgatgctgtcgccggaccggttgccggtttcggac
aaggatcaaaaggcgctttacgacctgatctggaagcggacgctggccagccagatggaa
tcggcgcggatggagcgtaccacggtcgagatcggctcggccgatggacaggtcggtctg
cgggccactggtcaggtgatgctgtttgacggctttctcaagatctatgatcagggccgc
gacgacgaagaggatgaggacggccgccgcctgccgctgatccacgagggcgagaccccc
gaaaagcgttcggtcacgcccgaacagcatttcacccagcccccgccgcgctataccgag
gcaacgctggtcaaacgcatggaagagctggggatcggccggccttcgacttatgcctcg
atcatcggcacgatccaggaacgcgactatgtccgcaaggaacagaaccgcctgatcccc
gaggataagggccgcctggtcacgatctttttgcaaaaatactttccgcgctatgtcagc
tatgacttcaccgccaatctggaaggtgagctggacgatatctcgtcgggcgagcgggcc
tatcgtgaagtgctgcgccgcttttggcgcgatttcaccgcggcgctggaaagcacggcg
gatctgcgtatcggcgaagtgcttgaggcgattgacgacgcgctggccccgcatctttac
ccgccgcgtcccgatggttcggacccccgcgaatgcccgctgtgccacaaggggcggctg
catctgaaaaccgcgcgttcaggtggggcgttcatcgggtgttcaaactatcccgaatgc
cgctttacccggccgatcagctcgcccgagggcgaggtcatgggcgacaccgtcctgggc
gtcgacaatggtgatgagatcagtctgaagaacggccgatttggcccctatgtccagcgc
ggcgaggcgacggccgagaatcccaagccgccgcgcgcctcgatccccaagggttgggat
accgggtcggtcgatcttgagcgggcgctggcgctgctggccctgccgcgcgaaatcggc
ccccatcccgaggacggcgtgctggtcgaggccgggatcggccgctatggcccctatgtc
aaacatggcgcgacctatgccaacctgcccgatgtggacgaggtgtttaccatcggcatg
aatcgcgcggtcgaggtcctggcctcgaaacggggtcgtggccgggcggcgcccgctgca
cctttggccgaactgggcgagcatccccagggcgggccggtgcaggtgcttgatgggcgt
tatgggccctatgtcaaatggggcaaggtcaacgccacgctgcccagggatcttgccccc
ggcgatgtcacgcttgagcgcgcgcttgagctgatttcggagaaagcggcgaaatcgggc
aagaagccggccaggaaagctgcggcgaaaaagccggcagccgccaaaaagcctgctgcc
aagaagacggcctcaaaggcgaaaaaagccgagtaa
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