Paracoccus kondratievae: F8A10_09965
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Entry
F8A10_09965 CDS
T06245
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkd
Paracoccus kondratievae
Pathway
pkd03030
DNA replication
pkd03430
Mismatch repair
pkd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F8A10_09965
03430 Mismatch repair
F8A10_09965
03440 Homologous recombination
F8A10_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkd03032
]
F8A10_09965
03400 DNA repair and recombination proteins [BR:
pkd03400
]
F8A10_09965
Enzymes [BR:
pkd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F8A10_09965
DNA replication proteins [BR:
pkd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F8A10_09965
DNA repair and recombination proteins [BR:
pkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F8A10_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
PAS_9
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
PAS_4
Motif
Other DBs
NCBI-ProteinID:
QFQ87735
LinkDB
All DBs
Position
1:complement(1989130..1991250)
Genome browser
AA seq
706 aa
AA seq
DB search
MRSATRLLLPVVLPGLAVALWVLGGVALFYAALSPERREGVSAGLAPALAEGGALIFGWW
LAGAVLAGWLAARLYARHVAAPARLADAARLLAGNADAPRAQAAGPEALSGLAEALNRLA
DERRTLQTDMARLVAEAQHKVAQERDQLGALMAELRQSVIVCNLDGRILLYNDHARSMFR
RVSGGGDVIGLGRSIHTVIERALIDHARDTVDRHIARGEAPVSAQFVTTTPAGSLLHVVL
APVRPQAGESDQISGYVLLVDDITGDYAAQSRRDRRLIELTEASRASLANMQAALDMLDY
PDLQPAERDGFHAIVRDEVTAMGQRLKAMTADASQEILTRWPLQEMLGDDLLAAASRHVQ
AQTGAEVAVGNADDGLWLRVDSFSLIQALGALAVQVAGAQSSLTLRLAPAATPGWAHLDL
VWPLEVGTGPGTAGAVAGQAEVDRARDIAERHGGELWLEQDRPAGQSFFRFLLPTALSGP
EIAWPESRPEFYDFDLFAASDSSRSLDDQPLDQLTYTVFDTETTGLNPAEGDEIIQIGAV
RILNGKLLLGERFDQIVDPGREIPEASIPYHGIHPEMVRGQPRIAEVLPVFHAYTADTVL
VGHNVAFDMRFLQMKEEVTGLRFDQPVLDTLLLASIAQPHEPSHSLEAIAERLGIEVANR
HNAAGDALVTAQVFLRLWPLLQARGIATLGQARAAAENSYYARLRY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagatccgccacccgcctcctgttgcctgtcgtcctaccgggtctggcggtggcgcta
tgggtgctgggtggcgtggcgctgttttatgccgccctgtcgcccgagcggcgcgagggg
gtgtccgccgggcttgcgccggcgctggccgaaggcggcgcgctgatctttggctggtgg
cttgctggggcggtgctcgctggctggcttgccgcgcgtctttacgcccgccatgttgca
gccccggcgcggctggctgatgcggcgcggctgcttgccgggaatgccgatgcgccccgc
gcgcaggctgctggccccgaggcgctgtccgggctggccgaggcgctgaaccgtcttgcc
gacgaacgtcggaccttgcagaccgacatggcgcgtctggtggccgaggcccagcacaag
gtcgcgcaagagcgcgaccagcttggtgcgctgatggctgagctgcgccaaagcgtgatc
gtctgcaaccttgatggtcgcatcctgctttacaatgaccatgcccgcagcatgttccgc
cgggtctcgggcgggggggatgtgatcgggcttggccgctcgatccatactgttatcgag
cgggccctgatcgaccatgcgcgcgatactgtggaccgccatatcgcacggggagaggcg
cccgtttcggcgcaattcgttaccaccacgccagcgggcagtctgctgcatgtcgtgctg
gccccggttcgcccgcaggccggggaatccgatcagatcagtggctatgtgttgctggtt
gatgacattaccggcgattatgccgcccagtcccgtcgcgaccgtcgcctgatcgagctg
accgaggccagtcgcgcctcgctggccaatatgcaggcggcgctggacatgctggattat
cccgacctgcaaccggccgagcgggacggctttcacgccatcgtccgcgatgaggtaacg
gcgatgggccagcggctaaaggcgatgacggcggatgcctcgcaagagatcctgacccgc
tggccgctgcaagagatgctgggcgacgacctgcttgctgccgcttcgcggcatgtccag
gctcagaccggggccgaggttgcggtcgggaatgccgatgacgggctgtggctgcgcgtt
gacagcttttccctgattcaggcgcttggtgcactggcggtgcaggtcgcgggggcgcag
tcatccctgacgctaagacttgcccccgcagcaacgccgggctgggcgcatctggatctg
gtctggccgcttgaggtcgggacggggccgggcactgccggggccgtcgctggtcaggcc
gaggtggaccgtgcccgtgacatcgcggaacgtcacggcggtgaattgtggctggaacag
gaccgtccggcggggcagtccttctttcgctttctgctgccgaccgccctgtccggaccc
gagatcgcctggcccgagtcccggcccgaattctatgattttgacctgtttgcggccagc
gattccagccgctctttggacgatcagccgctggatcagctgacctataccgtctttgat
accgagacgacgggtctgaatccggccgagggcgatgaaatcatccagatcggcgcggtg
cgtatcctgaacggcaagctgttgctgggcgagcggtttgaccagattgtcgatccgggc
cgcgagatccccgaggcctcgatcccctatcacggcatccaccccgagatggtgcggggt
cagccgcgtatcgccgaagtgctgcccgtttttcacgcctataccgccgatacggtgctg
gtcgggcataacgttgcctttgacatgcggtttttgcagatgaaagaggaggtgacaggc
ctgcgctttgaccagccggttctggatacgctgctgttggccagtatcgcccagccccat
gaaccttcgcattcgcttgaggcgattgcagagcggttggggatcgaggtcgccaatcgc
cacaatgccgccggcgatgcgctggtgacggcgcaggtgttcttgcggctttggccgctg
ttgcaggcgcggggcattgcgacgctgggtcaggcacgtgcggcggccgagaactcgtat
tatgcgcggctgcgctactag
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