Paracoccus kondratievae: F8A10_10540
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Entry
F8A10_10540 CDS
T06245
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pkd
Paracoccus kondratievae
Pathway
pkd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F8A10_10540 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkd03019
]
F8A10_10540 (recQ)
03400 DNA repair and recombination proteins [BR:
pkd03400
]
F8A10_10540 (recQ)
Enzymes [BR:
pkd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F8A10_10540 (recQ)
Messenger RNA biogenesis [BR:
pkd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F8A10_10540 (recQ)
DNA repair and recombination proteins [BR:
pkd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F8A10_10540 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QFQ87832
LinkDB
All DBs
Position
1:complement(2104790..2106826)
Genome browser
AA seq
678 aa
AA seq
DB search
MSAAPLLRQVFGFDSFRPGQEEIVNAVASGRDVLAIMPTGGGKSLCYQLPALMRDGLTVV
ISPLIALMRDQVRALTEAGVAAAALTSGNSDEENSEVLRAMAARELRLLYMAPERLASGA
TVPMLRRAGVQAIAVDEAHCVSQWGHDFRPDYLRVGELRRVLSVPLAAFTATADAETRDE
IVQRLFDGAQPQTFLRGFDRPNIHLAFQPKDGPRRQILDFAAARRGQSGIIYCGTRAKTE
TLAAALNQSGLAATAYHGGMEADARREVEARFQREDGLIVVATVAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRGGRDGAPAETLTLYGPDDIRLRRGQIDESLAPPERKAADHARLN
ALLGLAEATGCRRIALLRYFGEKAVAPCGNCDICDDPPECFDATEAAQKVLSAILRTGQT
YGSGHIIDVLTGTMTERVQARGHDHLPTFGVGRDLSKPQWQAVIRQMLGLDLIRPDSERH
GGLAITLAAHPVLRGEERITLRRDTMARARPAVVVRSQVDPEDEPLFSALKAKRRALAEA
ARVPAYVIFPDRTLQEMARLRPGTLDEMARVNGVGAKKLESYGEEFLQVIAKDVPPMHPA
RRALAGRPSGQLFDRLAQAQVRLMRGVDGTEKPLSVGNSALRRIAEDRPRDLSRYLDPAR
LDRFGAAFAAEIAGDPEC
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgcccctgctgcgtcaggtcttcggcttcgattcctttcggccggggcag
gaagagatcgtcaatgccgtggcctcgggccgcgatgtactggccatcatgccgaccgga
ggtggcaagtcgctgtgctatcagcttccggcgctgatgcgcgacgggctgacggtggtg
atttcacccctgattgcgctgatgcgtgaccaggtgcgcgcgctgaccgaggcgggggtt
gctgctgctgcgctgaccagcggcaattccgacgaagagaattccgaggttctgcgtgcc
atggccgcgcgtgaattgcggctgctttacatggcgcccgaacggctggcctcgggcgcg
acggtgccgatgctgcgccgcgcaggtgtacaggccatcgcggtggatgaggcgcattgt
gtcagccagtggggccatgatttccgccccgattatctgcgcgtgggcgagctgcgccgc
gtgctttcggtgcctttggccgcctttaccgccactgccgatgcagaaacccgggacgaa
atcgtccagcgcctctttgacggtgcgcagccccagacctttctgcgcggctttgaccgg
ccaaatattcatctggcctttcagcccaaggacgggccgcgccgccagatccttgatttt
gccgccgcgcggcggggacagtccggcatcatctattgcggcacccgcgccaagaccgag
acacttgctgccgcgctgaaccagtcggggcttgccgccaccgcctatcacggcgggatg
gaggccgatgcccgccgcgaggtcgaggcgcgtttccagcgcgaggacgggctgatcgtc
gtcgccaccgtggcctttggcatgggcatcgacaaaccggatatccgctgggttgcccat
gccgatctgcccaagtcgatcgaggcctattatcaagagatcggccgcggtggccgtgac
ggcgcccccgcagaaacgctgacgctttacggtcccgacgatatccgtctgcgccgcggc
cagatcgacgaaagtctggccccgcccgagcgtaaggcggccgaccatgcgcggctgaat
gcgcttttaggtctggccgaggcgacgggctgccgccgcatcgcccttttgcgctatttc
ggcgaaaaggctgtcgcgccttgcggtaattgcgatatttgcgacgatccgcccgaatgt
ttcgacgcgaccgaggccgcgcaaaaagtgctgtcggccattctgcgcaccggtcagacc
tatggttcgggtcatatcatcgacgtgctgaccgggaccatgaccgaacgggtgcaggcc
cgcggccatgaccatttgccgacctttggtgtcgggcgcgacctgtcaaagccgcaatgg
caggcggtgatccgtcagatgctgggtcttgatctgatccggcccgactctgaacgccat
ggcggccttgccatcacccttgctgctcatccggtgctgcgcggagaagagcgtatcacg
cttcgccgcgacactatggcccgcgcccgcccggcagtcgtggtgcgcagccaggttgac
cccgaggatgagccgctgttttcggcgctcaaggccaagcgtcgggcgctggccgaggcg
gcgcgtgtccccgcctatgtcatctttcccgaccgcaccctgcaagaaatggcgcgcctg
cgccccggcacgctggatgagatggcgcgggtgaacggcgttggcgcgaaaaagctggaa
agctatggcgaggaattcttgcaggtcattgccaaggatgtgccgccaatgcatcccgcg
cgccgcgcgctggccgggcgtccctcgggccagctttttgatcggctggcccaggcgcag
gtccggctgatgcggggtgtggacggaacggaaaagccgctttcggtcggaaattctgcc
ttgcgccgcattgccgaagaccggccgcgcgacctgtcgcgctatctggatccggcgcgg
ctggatcgtttcggcgctgcatttgccgccgagatcgccggcgaccccgagtgctga
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