Paracoccus kondratievae: F8A10_18905
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Entry
F8A10_18905 CDS
T06245
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pkd
Paracoccus kondratievae
Pathway
pkd02020
Two-component system
pkd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F8A10_18905
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F8A10_18905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkd03021
]
F8A10_18905
Transcription machinery [BR:
pkd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F8A10_18905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
MarR_2
HTH_Crp_2
HTH_3
MarR
HTH_5
HTH_24
HTH_38
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QFQ89520
LinkDB
All DBs
Position
unnamed1:15740..16876
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AA seq
378 aa
AA seq
DB search
MQSQEQRQIRGLALSQQMRLSLDLLRMDGARLRRRLRLEAARNPCLELIEAADALSPRQA
LTDQIGLLRLSGADAGLARALVHCLDDHGWLVDPLPEIAGWLDVPDARIEALLPVLQGLE
PPGVFARDLAESLRLQLRARGRLDPMIERLLGRLDLAAAGDLAAIQAHCGCDGEDAAGML
ADLRALSPYPLAEGAVPAAPPELEWTPDGGVRPLDAPALGLRPEGRAGDTALACALVSAC
QARGASLLRIASAMAEVQAGWLRGEGALRPLTLSDLAARLGLAKSTISRAVAGVAMRSPR
GTVPLRRLLLAPASPRNPGIGREAALAALRGLIAEWPAGQRISDAALTQALMGQGVTLSR
RTVAKYRAELGVSGWGRG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcaggaacagcgccagatccgcggccttgcgttaagccaacagatgcggctg
tcgcttgatttgttgcgcatggacggcgcgcgcctgcgccgcagattgcggctggaggcg
gcgcgcaacccttgtcttgagctgatcgaggcggcggatgcactgtccccccgacaggcg
ctgacggatcagatcggcctgttgcgcctttccggggcggatgccgggcttgcccgcgct
ttggtccattgccttgatgatcacggctggctggttgatccgctgcccgaaattgcaggc
tggctggatgtgccggatgcgcggatcgaggcgcttttgccggtattgcaggggcttgag
ccgcccggcgtctttgcccgcgatctggcggaaagtctgcggttgcaactgcgggcgcgc
gggcgactggacccgatgatcgagcggctgcttgggcggctggaccttgccgccgcaggc
gatctggcagcaattcaggcccattgcggatgcgatggtgaggatgcggcaggaatgctt
gccgatctgcgcgccctgtcgccctatccgctggctgagggcgcagtccccgctgcgccg
cccgagctggagtggacccccgacggcggtgtccgaccgcttgatgcccccgcccttggc
ctgcgtccagaggggagggctggggacacggccctggcctgcgcgctggtttcagcgtgt
caggcacggggggcaagcctgttacgcatcgcctcggccatggccgaggttcaggcggga
tggctacgcggagagggggcgttacggccgctgaccctgtctgatctggccgcgcggctg
gggctggcaaaaagcacgatcagcagggcggtcgccggggtggccatgcgcagtccgcgc
ggtaccgtgcctttgcgcaggttgcttttggcacctgccagcccgcgaaacccgggcatt
gggcgcgaggcggcattggcggcactgcgcgggctgatcgcggaatggccggcaggtcag
cggatctcggacgcggcgctgacgcaggcacttatggggcagggcgttaccttgtcgcgt
cggacagtggcgaaataccgggctgaactgggcgtttccggctgggggcggggctaa
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