KEGG   Pseudomonas kribbensis: DLD99_00305
Entry
DLD99_00305       CDS       T06348                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pke  Pseudomonas kribbensis
Pathway
pke03030  DNA replication
pke03410  Base excision repair
pke03420  Nucleotide excision repair
pke03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DLD99_00305
   03410 Base excision repair
    DLD99_00305
   03420 Nucleotide excision repair
    DLD99_00305
   03440 Homologous recombination
    DLD99_00305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pke03032]
    DLD99_00305
   03400 DNA repair and recombination proteins [BR:pke03400]
    DLD99_00305
Enzymes [BR:pke01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DLD99_00305
DNA replication proteins [BR:pke03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DLD99_00305
DNA repair and recombination proteins [BR:pke03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DLD99_00305
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DLD99_00305
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AXI58976
UniProt: A0A345RI60
LinkDB
Position
complement(64141..66945)
AA seq 934 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVKALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLQMGPEDPAKLLELYTLLEFKSWINDLERDAKRLELSS
AAAPEPVVDLFSAPAEEAPVAPAEAAYETILDQARFDVWLEKLKNAKLFAFDTETTGVDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DMNILANCAIGGDQNEGITVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQTLFEKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAALLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSRDEGLMNAFRNNLDVHTATAAEVFKVELNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGFVETIFGRRLYLPDINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLSASGLDAKVILQVHDELVLEVREDLVD
QVRDEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgcgcctttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgaccggtgcggtcaaaggcgtgctg
aacatgctcaagagcttgcgcaagcagtatccggacagcccgttcgccgtggtgttcgac
gccaagggcgggacatttcgcgatgagatgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgacatgcgcctgcagatcgagccgctgcaccagagcgtgaaagccctcggt
tttccgctgctgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccaatcgtccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattaccttggtcaacaccatgtccggtagctcgatggacgtggag
ggcgtgaaggagaaattcggcgtcgctccggagcagatcatcgattatctggccctgatg
ggcgattcttccgacaacatccccggtgttcccggcatcgggccgaaaaccgcgtccggc
ctgttggtcggcgtcaacggcggcctgaccgagctctacgcgcagctcgacatcgtgccg
accctgccgattcgcggcgccaagaccctgccggccaagcttgaagagcacaaggagatg
gcgttcctctcctatcaactggcgaccatcaaggtcgacgtaccgctggacatcggcctc
gacgacctgcaaatgggcccggaagatccggccaagctgcttgagctttacaccctgctg
gagttcaagagctggatcaacgatctggaacgggatgccaaacgtctggagctgagcagc
gccgccgcgcctgagccggtcgtcgacctgttcagcgcacctgcggaagaagcaccggtc
gctccggccgaggccgcgtacgaaaccatcctcgatcaggcccgtttcgatgtctggctg
gaaaaactgaagaacgccaagctgttcgccttcgacaccgaaaccaccggcgtcgacgcg
caacaggcgcaactggtcggtctgtctttcgcggtgcaggccaacgaagcggcctacatc
ccgctgacccactcctacatcggtgtgccggagcagctggatcgcgacaccgtgttgcgc
gcgctcaagccaatcctcgaagacccgaacaagctcaaggtcggccagcacgccaagttc
gacatgaacatcctggccaactgcgccatcggcggcgaccagaacgaaggcatcaccgtg
cgcggcatcgccttcgacacgatgcttgagtcctacgtgctcaactccaccgccacccgt
cacgacatggacagcctggcgcagaagtacctggatcacactaccgtgagcttccaggac
atcgccggcaaaggcgccaaacagctgaccttcgaccagatcgcgctggaacaggccggc
ccatacgccgccgaagatgccgacgtgaccctgcgcctgcaccagacactgttcgaaaaa
ctcagcgccatcccgagcctggccagcgtgctgaccgacatcgagatcccgctggtgccg
gtgctggcccgcatcgagcgtcagggtgcattcgtcgatgccgcgctgctgggcgttcag
agcatcgagctgggcgacaagatggtcgcgctggagcgtgaagccttcgagatcgccggt
gaagaattcaacctcggctcgccgaagcaactgggtgtgattctctacgaaaaactcggc
ctgccggtgctgaaaaagaccgccaagggtcagccgtccactgccgaagaagtgctggca
aaactggccgaagacgatcaccgcctgccaaaagtgctgatggaacaccgttccatgagc
aagctgaaaagcacctacaccgatcgcctgccggagcagatcaacccgcgcaccgggcgt
atccacacctcgtatcatcaggctgtggcatcgaccggtcgcttgtcctcaagcgatccg
aacctgcagaacatcccggtgcgcaccgccgaaggccggcgcatccgtcaggcctttgtc
gcgccgaaaggctacaaactgctggcggcggactactcgcagatcgaattgcggatcatg
gcgcacctgtcccgcgacgaaggcctgatgaacgccttccgcaacaatctggacgtgcac
accgcaactgccgccgaagtgttcaaggtcgagctgaacgaagtgacgtccgaccagcgc
cgtggcgccaaggcgatcaacttcggcctgatctacggcatgggcgcgcagaagctgggc
aaggacatcggcgtcgacaccaagaccgccaaggcctacatcgatacctacttcgcacgc
tacccgggcgttcgcgaatacatggatcgcacccgtgcgcaggcggcggatcaaggcttc
gtggaaacaatcttcggccgtcgtctgtatctgccggacatcaactccaacaagccgcag
gagcgcgcagctgccgaacgcacggcgatcaacgcaccgatgcagggcaccgcagcggac
atcatcaagaaagccatggtggcggtggacaactggctgagcgcttcgggtctggacgcc
aaagtcatcctgcaggtgcacgacgaactggtgctggaggttcgcgaggatctggtggat
caggttcgcgacgaaattcgcgtccacatgagtgaagcggcgaagctggatgtgccgttg
ctggtggaagtcggggttggcaacaactgggacgaggcccactga

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