Pseudomonas kribbensis: DLD99_02920
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Entry
DLD99_02920 CDS
T06348
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
pke
Pseudomonas kribbensis
Pathway
pke02024
Quorum sensing
pke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLD99_02920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DLD99_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pke03019
]
DLD99_02920
03036 Chromosome and associated proteins [BR:
pke03036
]
DLD99_02920
Messenger RNA biogenesis [BR:
pke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DLD99_02920
Chromosome and associated proteins [BR:
pke03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DLD99_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AXI59463
UniProt:
A0A345RJJ7
LinkDB
All DBs
Position
635849..636109
Genome browser
AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSATESEAGDAEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaatactttacgtaaagagaaagtt
ggggtttccatctacctggtcaacggtatcaaactgcaaggcacgatcgaatcgttcgac
cagttcgttatcctgctgaagaacaccgtcagccagatggtttacaaacacgctatctct
acagtcgtgccggttcgtccaattcgtctgccaagcgcaaccgaatccgaagcaggtgac
gctgagccaggtaacgcctga
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