Pseudomonas kribbensis: DLD99_06340
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Entry
DLD99_06340 CDS
T06348
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke03030
DNA replication
pke03430
Mismatch repair
pke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLD99_06340
03430 Mismatch repair
DLD99_06340
03440 Homologous recombination
DLD99_06340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pke03032
]
DLD99_06340
03400 DNA repair and recombination proteins [BR:
pke03400
]
DLD99_06340
Enzymes [BR:
pke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLD99_06340
DNA replication proteins [BR:
pke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLD99_06340
DNA repair and recombination proteins [BR:
pke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLD99_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AXI60102
UniProt:
A0A345RLD6
LinkDB
All DBs
Position
1392026..1395547
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTGMGMPAVAVTDQNNMCSLVKFYKNTMGAG
IKPICGADLWLSNKDPDGPLSRISLLVMNALGYRNLTELISRGFIDGQRNGMIIIEREWV
VEANEGLIMLSAAKEGEIGMAMIGGNPAEAEVLTREWMSVFPDRFYLEIQRTNRPNDEEQ
LHGAVALAEKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPDAVENTVEIAKRCNIDVKLGKHFLPDYPIPDGMTIDEYFRKVSFDGL
DERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARAQGKSFGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLQPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCASNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDEGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKSAEQTARTRDSGHADLFGGLFVEEDADVYALHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGDLLKRHRGACPITMEYTSPDAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcggatcaagccgctggtcaaggccctgaccggcatgggcatgccggccgttgcggtt
accgaccagaacaacatgtgttcgctggtcaaattctataaaaacaccatgggcgcgggg
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggacccggatggcccgctg
agccggatcagcctgctggtcatgaacgccctgggctatcgcaacctgaccgagctgatt
tcccgtggcttcatcgacggtcagcgcaacggcatgatcatcatcgagcgcgagtgggtg
gtcgaggccaacgaaggcctgatcatgctgtccgccgcgaaagagggcgagatcggcatg
gccatgatcggcggtaaccctgccgaggccgaagtcctgacccgtgagtggatgtcggtg
ttcccggatcgtttctatctggaaatccagcgcaccaatcgcccgaacgacgaagaacaa
ctgcacggcgctgtggccctggccgagaaactcggcgcgccgctggtcgccaccaacgat
gtgcgcttcatcaagcaggaagacttcgccgcccacgaaacccgcgtctgcatcggtgag
ggccgcgccctcgacgacccgcgtcgttcgaagaattacagcgatcagcagtacctgaaa
agcgccgaggaaatggccgagctgttcagcgacctgccggatgccgtggaaaacaccgtc
gaaatcgccaagcgctgcaacatcgacgtgaagctgggcaagcacttcctgccggactat
ccgattcccgatggcatgaccatcgacgagtatttccgcaaggtgtcgttcgatggtctg
gacgagcgcctcagcgtgctgctgcccaaggacaccaccgaagattacgaggccaagcgt
caggtctatgtcgaccggctgaatttcgagctggatatcatcatccagatgggattcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgccggtg
ggcccgggccgggggtcgggtgccggatcgctggtggcttatgtgcagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgtttccttaaccccgaacgggtatcc
atgcccgacttcgacgtcgacttctgcatggacggccgcgaccgggtaatcgactacgtg
gccgaaaagtacggccgcaacgccgtaagccagatcatcaccttcggttccatggcggcc
aaggctgtggtgcgggacgtggcgcgggcccagggcaagtcgttcggtctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgcgacttcatcaaggtcgatgaagaagcggcagaaatctgggagatggcg
cgcaaactcgaaggcgtggtgcgtaacgtcggtaaacacgccggtggtgtagtgatcgcg
ccgaccaagctgaccgacttctcgccgatctattgcgatgaggctggcgacggcctggtg
acccagttcgacaaggatgacgtggaagcggctggtctggtgaagttcgacttcctcggc
ctgcggaccctgacgatcatcgactgggcgctgaagaccatcaaccgcgaccgcgccaag
gtcaacgagccgccgctggacatcgcgttcatcccgctggatgacaagccgacctatcag
ctgctgcaaaaagctgaaaccaccgcggtgttccagcttgaatcccgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctcgaagaccttatcgcactggtggccctgttc
cgtccgggcccgttgcagtccggcatggtggatgacttcatcaaccgcaagcacggtcgc
gcggaactggcgtatccgcacccggattaccagtacgaaggcctgcagccggtacttgca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtcatggcc
ggttacaccctcggtggtgcggacatgctgcgtcgggcgatgggtaagaagaaacccgag
gaaatggccaagcagcgcggcggtttcatcgagggttgtgcgtcgaacaatatcgacgcg
gatcttgccggtaacattttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaaggctcactac
ccggcgccgttcatggccgcggtgctgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaagctgcgcctcgacgcgccggacgtgaacacg
tcggagttcaagttcacggtgaacgacgagggtcgcatcgtgtacggtctgggcgcgatc
aaaggcgtcggcgaaggcccggtggaagcgattaccgaagcgcgtcaggccggtccgttc
aaggatctgttcgacttctgcgcccgggtcgacctcaagcgcatcaacaagcgtacgctg
gacggtctgatccgcagcggcgcgctggatcgcctcggcccgtacttccatgacgagcaa
aaggcgtatcaggccaacatcgaccgcaaccgcgccgtgctgctggcggcgatggaagag
gcgatcaagtcggccgaacagactgcacgcacccgcgacagtggtcacgccgacctgttc
ggcgggctgttcgtcgaggaagacgcagacgtttacgcgctgcatcgcaaggccaaggaa
ctgacgctcaaggaacgcctgaagggtgaaaaagacacccttggcctgtacctgaccggc
cacccgatcgacgaatacgaaggcgaaatccgccgtttcgcccgccagcgcatcatcgac
ctgaaaccggcccgggacacccagaccgtggcggggatgatcatcgccctgcgggtgatg
aagaacaaaaagggcgacaagatgggtttcatcaccctcgacgaccgctccgggcggatc
gaggcgtcgctgttcgccgatgcgttccactccgcgcaatcgctgttgcagaccgatgcg
atggtggtggtcgaaggcgaggtcagcaacgatgacttctccggcggcctgcgcctgcgg
gtcaagcgggtgatgagcatggaagatgcgcgcaccaacctggccgagagcctgcgcctg
aaactgcagacccaggacctgaaaggcgatcagctacgctggttgggggatttgctcaag
cgtcatcgcggggcgtgcccgatcaccatggaatacaccagcccggatgcgaagaccttg
ctgcagtttggcgagacctggcggatcgacccggcggatgccttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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