Pseudomonas kribbensis: DLD99_06400
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Entry
DLD99_06400 CDS
T06348
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pke
Pseudomonas kribbensis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pke03016
]
DLD99_06400
Enzymes [BR:
pke01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DLD99_06400
Transfer RNA biogenesis [BR:
pke03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DLD99_06400
Prokaryotic type
DLD99_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
AXI60114
UniProt:
A0A345RLE8
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All DBs
Position
1406989..1408047
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGDALGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFNGDKAAIDERLQLIAKQGIPNYFGAQRFGHDGGNVVDARSW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQRAQVGDLLAFTDSRSFFPAGV
AECSDPRLAILDLHPTGPQWGEGDSPAAGAVHDLEQAIAAREADLRDWLINAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgctcggcccgcgggcctatggcgacgccctcggcaccgcggta
ctgaaagccattgccgaagattttcaggtcgatgaagtcctcgacattccattcagcggt
gacggcgagcacctgtggatctgggtggaaaagcgcggtctgaacaccgaagaagcggct
cgacgcattgccaaggcggccggcgtgccgctgcgcacggtcagttacgccggtctcaaa
gaccgtcaggcgctgacccgccagtggttcagcgtgcaattgccgggcaaggctgacccg
gatctgtcggcggcggaaaacgacacgctgaagatcctcaagaccacccgccacaagcgc
aagctgcaacgcggcgcgcattcggccaacggtttcaccttgcgcctgactcaattcaat
ggcgacaaagccgccatcgacgagcgtctgcaactgattgccaaacaaggtataccgaac
tacttcggcgcccagcgtttcggccatgacggtggcaacgtggtcgatgcccgttcatgg
gcggcgcgcaaggctctgccggagcagcgcaatgtgcgttcgcgcctgctgtcgaccgct
cgcagctttctgttcaatcaggtactggcggcgcgtgttgccgatggtacctggcagcgc
gcccaggtcggcgatctgctggcgttcaccgacagccgcagctttttcccggcaggtgtt
gccgagtgcagcgacccgcgcctggcaattctcgatctgcatccgaccggcccgcagtgg
ggcgaaggtgactcaccggccgccggcgctgtccatgatctggagcaggcaatcgccgca
cgcgaggcggatctgcgcgattggttgattaatgccggtatgagccacgaacgtcgtatc
ctgcggctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgaactcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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