Pseudomonas kribbensis: DLD99_11575
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Entry
DLD99_11575 CDS
T06348
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pke
Pseudomonas kribbensis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pke01011
]
DLD99_11575
Enzymes [BR:
pke01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DLD99_11575
Peptidoglycan biosynthesis and degradation proteins [BR:
pke01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DLD99_11575
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM_RLK
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AXI61087
UniProt:
A0A345RP71
LinkDB
All DBs
Position
complement(2494883..2496349)
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AA seq
488 aa
AA seq
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MSSSIRKSVNSDALTRLAQAIAVAVSATLAGCSSHAPQTEATHTPNIAARAKQKPIWLSE
KPSPQVPQDIWERMRGGFQLQEGLGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVE
RLEERNMPLELALLPVIESAYNPMAYSRADAVGLWQFIPSTGRYYNLRQTRFYDGRRDIT
ASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPAET
QAYVPKLLALSQVVLSPEAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQ
LNPAFKQRTTIDGPQHLLVPTSKAQLLTASLQTMRPEELISPRSLKPVFEGADPTEVAKL
KRAYRVKRGDNLGSIAKANKVDVKDLQRWNKLTGKNLKVGQTLVMQDTTKRTPAGKSGGR
INTVIAANTKSKAKDDSKQQTQYKVQRGDTLYVVAKRFNVEMQHLKRWNPGAGKALKPGQ
MLTVYQPH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatccatacgtaagtccgtcaattcagacgcattgacccgcttggcgcaagcc
atcgcggtggctgtgtccgccacgctggcgggctgttccagccatgctccgcagactgaa
gcgacccatacgccgaacattgctgcgcgagccaagcagaagcccatctggttgtccgag
aagcccagcccgcaggtgccccaagacatctgggaacgcatgcgcggcggttttcagctt
caggaaggtctgggcgtgaacccgcgcatcgagcaacagcgcctgtggttcgccagtaac
ccttcctttctcgagaacgccggcgagcgcggcagcctctacattcattacatcgtcgag
cgcctcgaagaacgcaacatgccgctggagctggccctgctgccagtgattgaaagtgcc
tacaacccgatggcctattcccgggccgacgcggtggggctctggcaattcatcccttcc
accgggcgttattacaatctgcgccagacccgtttctacgacggccgtcgcgacatcacc
gcctcgacaacggcagcgatggattacctgacccgcctgcacgacatgttcaacggcgac
tggctgctggccctggcggcctacaatgccggcgaaggcacggtcagccgcgccatcgaa
cgcaacgaaaagctcggcctgccgaccgactactggaacctgccgctgccggcagaaacc
caggcgtatgtgccgaaactgctggcactgtcgcaagtagtgctgtcgccggaagcctac
ggggtgaacctcaacccgatcgccaacgaaccttacttccaggtcgtcgaaatcaaccag
cgcatggacctgtccaaggtcgccgccgtggccaacatcgacgaagacgagctgttccag
ctcaacccggcgttcaagcagcgcaccaccatcgacggcccgcagcacctgctggtgccg
acgtcgaaggcccagctgctgaccgccagcctgcagaccatgcgtcctgaagagctgatc
agccctcgttcgctgaagccggtcttcgaaggcgccgatccgaccgaagtcgcgaagctc
aagcgtgcgtaccgggtcaaacgcggcgacaacctcggctccatcgccaaggccaacaag
gtcgacgtcaaggacctgcaacgctggaacaagctgaccggcaagaatctcaaggtcggc
cagaccctggtcatgcaggacaccaccaaacgcaccccggccggcaagtccggcgggcgc
atcaacaccgtgatcgcagccaacaccaagagcaaagccaaggacgacagcaagcagcag
acccagtacaaggtccagcgcggcgacacgctgtatgttgttgccaagcgtttcaacgtc
gagatgcagcatctcaagcgttggaacccgggtgccggcaaggcactcaagcctgggcag
atgctcacggtctaccagccgcactga
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