Pseudomonas kribbensis: DLD99_15395
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Entry
DLD99_15395 CDS
T06348
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pke
Pseudomonas kribbensis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pke03032
]
DLD99_15395
03400 DNA repair and recombination proteins [BR:
pke03400
]
DLD99_15395
Enzymes [BR:
pke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DLD99_15395
DNA replication proteins [BR:
pke03032
]
Prokaryotic type
DNA Topoisomerases
DLD99_15395
DNA repair and recombination proteins [BR:
pke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DLD99_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AXI61800
UniProt:
A0A345RR84
LinkDB
All DBs
Position
3386626..3387654
Genome browser
AA seq
342 aa
AA seq
DB search
MPDIALTDVLPSDLHYVDDTQPGLTRKKLRGKFCYFDAIGQRIRDPDEIKRINALAVPPA
YTDVWICADPRGHLQATGRDARGRKQYRYHPRWREVRDADKYSRLREFGMALPKLRKQLE
VLLDAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEINGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHTVSSSDVNTYLQTLTG
ADFTAKDYRTWAGSALALAVLRELQWESEAEAKRHVVEMVKGVARQLGNTPAVCRKCYIH
PAVVEHFMLGALAELPKPRIRKGLRKEEVALALFLERMSDMA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatattgcgctgaccgatgtgttgccttcggacctgcattacgtcgatgacacc
cagccgggacttacccgcaagaagctgcgcggcaagttctgctacttcgacgcaattggc
cagcgcatccgcgatcctgatgaaatcaaacgcatcaatgcgctggctgtgccgccggcc
tacaccgatgtgtggatctgcgcggaccctcgcggccacctgcaagccaccggccgcgat
gctcgcgggcgcaaacaataccgctatcacccacgctggcgcgaagtgcgcgatgccgac
aaatactcgcgactgcgcgagttcggcatggcgctgccgaagctgcgcaaacaactggag
gtgctgctggacgcgccggggttcagccgcgacaaggtcatggctacggtaatcacgctg
ctcgatgccacgctgattcgcgtcggcaatacgcaatacgcacgggacaatcgatcgtac
ggcctgaccaccttgcgcagccggcatgtcgagatcaatggcagcgcgatcctgttccag
tttcgcggcaagagcggtatcgagcaccagatcaccgtgaaagaccggcgcctggcgcgg
atcatcaagcgctgcctggaaatcccagggcagaacctgtttcagtatctcgatgaaaac
ggcgagcggcacaccgtcagctcttccgacgtcaacacttacctgcaaaccctgactggc
gcggatttcaccgccaaggactaccggacctgggccggcagcgccctcgccctggcggtg
ttgcgggagttgcaatgggagtcggaagccgaggccaagcggcatgtggtggagatggtc
aaaggtgtggcgaggcaattgggcaacacgccggcggtgtgccgcaaatgctatatccac
ccggccgtggtggagcatttcatgctgggcgcactggcggagctgccaaagccgaggatc
cgcaaaggtctgcgcaaggaagaagtcgccttggcgctatttcttgagcgcatgtctgac
atggcttga
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