Pseudomonas kribbensis: DLD99_16250
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Entry
DLD99_16250 CDS
T06348
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pke
Pseudomonas kribbensis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pke03400
]
DLD99_16250
DNA repair and recombination proteins [BR:
pke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLD99_16250
Archaeal homologous recombinant proteins
DLD99_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AXI61959
UniProt:
A0A345RRP3
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All DBs
Position
3583419..3584663
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHSCFLEWLLRQLKLAQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDS
ERLLLPLPNASGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLIEAANARRQPG
QALVAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEISYQHQILDVVLDGETLVSVEPILIPRSVNLQRLGPAPLAEILLQL
ADLPNIDLLAETQRQPWLEVRVTLDEPQPDLRHQVESALQGKAVRLVRIAAEYAGNRGAD
GVEDGSALIELDQLTPQELFSRAWLDNYGNEVDEQTLKDFAELLQDVQMEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcaccttgggcagaacctgcacggccaggagcgc
gatttcgaacacagctgttttctcgagtggctgctgcgccaattgaagctggcgcagccg
gacgtgctgctgatcgccggcgacatcttcgacacggtgaatccgccggtcaaagcccag
gaacgcctctacgatttcatcgtcagcgcccacgaacagcagccgttgctgactatcgtg
atgattgccggcaaccacgattccggctcgcggatcgaactgcccgcgccgttgatgcgg
cgtttgcgtacccatgcgttgggccgggtgctgtggctggacgacggccaactcgattca
gaacgcctgttgttgccgttgccgaatgcctcgggcgagatcgccgcatggtgcctggcg
ctgccgttcctgcgcccggccgaagtgaccggcgcacatctgggcgacaactatttgcgc
ggcatcggtcaggtgcatgaatggctgatcgaagcggccaacgccaggcgccagccgggc
caggcactggttgccattagccatgcgcacatggccggcgggtcggtgtcggaagactcc
gagcgcagcctgatcatcggcaacgccgaagccctgccggccagcctgttcggaccgagc
atcagctatgtcgccctcggccatttgcacaagccgcagaaggtcaatggcgaagaacgg
attcgctacagcggctcgccgattccgttgtccttttcggaaatcagttatcagcaccag
attctcgacgtcgtgctcgacggcgaaaccctggtcagcgtcgagccgatactgatcccc
cgttccgtcaacctgcaacgcctcggccctgcgccgctggcggaaatcctgttgcaactg
gccgacctgccaaacatcgatctgctggccgagacccagcgccagccgtggctggaagtg
cgcgtgaccctcgacgagccgcaaccggatctgcgccatcaggtcgaaagtgccctgcaa
ggaaaagctgtgcgactggtgcgaatcgccgccgaatacgccggcaatcgtggcgctgac
ggcgtcgaggacggcagcgcgctgatcgaactggatcagctcacaccacaggaattgttc
agccgcgcctggctcgacaattacggcaacgaggtcgacgagcaaaccctcaaggacttc
gccgagctgctgcaagacgtacaaatggagggcgagcagccatga
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