Pseudomonas kribbensis: DLD99_17220
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Entry
DLD99_17220 CDS
T06348
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pke
Pseudomonas kribbensis
Pathway
pke02025
Biofilm formation - Pseudomonas aeruginosa
pke03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DLD99_17220 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DLD99_17220 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pke02044
]
DLD99_17220 (clpV)
Secretion system [BR:
pke02044
]
Type VI secretion system
Imp/Vas secretion system core components
DLD99_17220 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_16
AAA_22
nSTAND3
Zeta_toxin
AAA_7
NBD_SMAX1
ResIII
AAA_25
AAA_14
T2SSE
IstB_IS21
ClpB_D2-small
Sigma54_activat
AAA_28
NACHT
SRP54
AAA_23
FtsK_SpoIIIE
IPT
Motif
Other DBs
NCBI-ProteinID:
AXI62137
UniProt:
A0A345RS71
LinkDB
All DBs
Position
3790308..3792848
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AA seq
846 aa
AA seq
DB search
MELASLIGRLNPDNRRALERAAQRCLQRGHHFVEIEHLLLELLDIDGGDFAFLLPRFGLE
RDALTAEINKALDLFKAGSTRTPALSSHTLGLLEDAVVQASVLGIDSIRSGLLLLALIDR
DERRSLLLNSASSLLRIPKEALRANLLEWTENSREHAGPRSVSSGNAAPRQDSVLDQYTQ
DLTADAHAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAG
DVPPSLQEVSLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSADKPIILFIDEAHTLIGA
GGAEGGSDAANLLKPALARGELRTLAATTWMEYKKYFEKDPALARRFQLVQVEEPDEITA
VEMLRGVAAKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTACARVALGQH
DVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLENESKTNVQAIRELETRWGE
ERVAVRELLETRRELLALSESADSDKPDEATDSRIDHLAAELLRLEAGLDAIRQDDPLVP
EQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGLRVMGQKTALATIAQRLQAYR
AGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKG
APPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVVD
FKNTVMLATSNVGAELLLDTPVAQIGSEPFNEALHKVLLQAFRPAFLARMTVVAYRPLDE
ATLEGIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGKL
AEWVLE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaaccgccgcgccctcgaacgc
gccgcccagcgctgtttgcagcgcgggcatcactttgtcgagatcgagcatctgttgctg
gaattgctcgacatcgacggcggcgactttgcctttctgctgccgcgtttcgggctggaa
cgggatgcactgacggctgaaatcaacaaggcgctggacctgttcaaggctggcagcacg
cgcacgccggcgctgtcttcgcacaccctgggtttgctggaagatgcggtggtgcaggcc
agtgtgttgggcatcgacagcattcgctccgggcttttgctactcgcgttgattgatcgt
gacgagcgccgaagtctgctgctcaacagtgcgtcgtcattgctgcggattcccaaggaa
gccttgcgcgcgaacctgctggagtggacggagaactcccgcgagcatgccggaccgcgc
tctgtttcttcaggaaatgcggcgccccggcaggattcggtactggaccaatacacccag
gacctgaccgccgacgctcacgccgggcgcatcgacccgatcgtaggtcgcgacggcgag
attcgtcagtgcatcgacattcttttgaggcgccggcaaaacaacccgattctggtcggc
gcaccgggcgtcggtaaaaccgccgtggtcgaaggcctggcgctgcgcattgctgccgga
gatgtgccgccgtcgttgcaggaagtcagcctgcgggtgctcgacctgggcctgttgcag
gccggtgccggggttaaaggtgaattcgaacaacggctcaaaggcgtgatcgatgccgtt
cgcagcgccgacaagccgatcatcctgttcatcgacgaggcgcacaccctgatcggcgcg
ggcggagccgagggcggcagcgatgcggccaacctgctcaaaccggcgctggcccgaggt
gagctgcgcactttggccgccacgacctggatggagtacaagaaatacttcgagaaagac
ccagccctcgcccgccgttttcaactggtgcaggtggaagagccggacgaaatcaccgct
gtggaaatgctccgaggcgtggcagcaaaactggaacagcaccacggcgtgcaagtgctg
gacgcggcgatccacgaagcggtgaaactctcccatcgctacatctccggccgccagcta
ccggacaaagccatcagcgtgctcgacactgcgtgcgcccgggttgccctgggccagcac
gacgtgccgccaccgctggaaagcctgcgccaccggcagaacagcttgaaagatgaagtc
gagcgcctgcgccgggagcaggccacggggctggatcatcgtgagcgcatcacgctgctg
gaaaatgaatcgaaaaccaatgtgcaggcgatccgcgaactggaaacacgttggggcgaa
gagcgcgtggccgtgcgcgaactgctcgagacccgtcgcgagttgctggcattgagcgaa
agcgccgacagcgacaaacccgacgaggctaccgacagtcgcattgatcatctggccgct
gaactgctgcgcctggaggcgggactggatgcgattcgccaggacgatccgctggtgccg
gaacaggtcgacagcaagaccgtcgctgccgttattgcaggctggaccggcatccctgtc
ggcaaaatgcttgccgatgaagcccatgccgtgcgcacccttggccaacgcatgggcttg
cgtgtgatgggccagaaaacggcactcgcaaccatcgcccagcgcctccaggcctaccgc
gccgggctcaccgatccgcaaaaaccggtcggcgtgttcctgctggtcggccccacgggc
gtcggcaaaaccgaaaccgcgtatgcgctggccgatgcgttgtacggcggcgaacgcaat
ctgatcagcatcaacctttccgaatatcaggaagcccataccgtcagccagctcaagggc
gcccctccgggttacgtcggttacggcagcggtggcgtgctgacggaagctgttcgacgc
aaaccgtattcggtggtgttgctggatgagatcgagaaggcgcatccggatgtgctggaa
gcgttttacaacgtcttcgacaaaggcttgatggaggacggtaccgggctggtggtggac
ttcaagaacaccgtgatgctcgccaccagcaacgtcggtgccgaactgttgctcgatacg
cccgtggcacagatcggctccgagcccttcaacgaggcgctgcacaaagtcctgctgcaa
gcgttccgcccggcgtttctggcgcgcatgacggtggttgcgtatcggccgctggatgag
gcgacgctggaaggaattgtgctggcgaagctggagaaactgcgcggacgctacaaggct
gcgaccggcaagcagttcgaatttgatgcgggaatcgtcaaggccgtgctcgccaaatgc
agcgcggcgggtgcgcgtgatgtcgagaatgtgttgatgacccaggtgaccgggaagctg
gcggagtgggtattggagtaa
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