Pseudomonas kribbensis: DLD99_18995
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Entry
DLD99_18995 CDS
T06348
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pke
Pseudomonas kribbensis
Pathway
pke02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DLD99_18995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pke03021
]
DLD99_18995
Transcription machinery [BR:
pke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DLD99_18995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
HTH_20
HTH_11
HTH_38
PhyR_sigma-like
TnsD
HTH_Tnp_4
AlcCBM31
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AXI62474
UniProt:
A0A345RT58
LinkDB
All DBs
Position
4181516..4182022
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AA seq
168 aa
AA seq
DB search
MSPFDPPLNQQVQTLYSEHHGWLQGWLQRKLGNRCDAADLAHDTFLRLLSRQVVKPLGNE
PRALLTHIAKGLVIDRWRRQDIERAYLETIASLPVAEVPSPETRYLILETLWRIEALLRE
LPAQTRDTFLLSQIEGLTYAQIATRLNVSLITVKRHMRAAFIACLSVA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccttttgatccgccattgaatcagcaagtccagacgctctacagcgaacaccac
gggtggctgcagggctggctgcagcgcaagctgggcaatcgctgcgatgcggccgacctt
gcacacgatacgtttttacgcctgctcagccgtcaggtggtcaaaccgctgggcaacgaa
ccccgggcgctgctgacgcacattgccaaaggtctggtgatcgaccgctggcggcgtcag
gacatcgagcgcgcctacctggaaaccatcgccagcctgcccgtcgccgaggtgccgtcg
ccggaaacccgctacctgattctcgaaaccctttggcgcatcgaagccctgctgcgtgag
ttgccggcgcagacccgcgacaccttcctgctgtcgcagatcgaaggcctgacctacgcg
cagatcgccacacgcctgaatgtttcgctgattaccgtcaaacgccacatgcgcgccgcg
ttcattgcctgcctgagtgtcgcctga
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