Pseudomonas kribbensis: DLD99_19510
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Entry
DLD99_19510 CDS
T06348
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pke
Pseudomonas kribbensis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pke03000
]
DLD99_19510
Transcription factors [BR:
pke03000
]
Prokaryotic type
Helix-turn-helix
Other families
DLD99_19510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
AAA_2
HTH_30
DUF134
HTH_1
AAA
HTH_20
AAA_7
HTH_23
HTH_22
HTH_28
Mga
HTH_29
HTH_7
Diguanyl_cycl_sensor
HTH_17
PAS_9
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXI62573
UniProt:
A0A345RTF7
LinkDB
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Position
complement(4293117..4295021)
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AA seq
634 aa
AA seq
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MTLIKTTDPKSHHEARLAREKLHLEGQVPDGVLRAEIDASWRRSLSHGVHFNGKHELALE
SSASLDVLLASNRLLIDAAIPAIDYLAERQGKEGLIILANSDATILAVEGRADRLKGSGL
QDITLGACWSEAARGTNALGTALVEARPTLIDCGEHYLDRLTDFSCTSVPIHCPQGEILG
VLDLTREGPLGRVHDSTALLSMAVSQIESRVFNNSFPDQIVLAFHSRRQYLESPWQGLLA
VSLGGQILAVSAQACQLLRAERSALVGKRCEEFLGVDGVQLLTRLQQGGVGSVQTAKGEF
FYKTLRAPARSVNLGGPPRGVAKTAKAQPDLEALAGNNARYARALRMARQGLANELPVLL
LGETGTGKEVIARALHLAGSRSDKPFIAVNCAAIPEGLIESELFGYREGAFTGSRRGGMI
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLK
RQVEDKQFREDLFYRVNGISVMLPALRERDDFAALVTRLLSKLDAPNAVLHDDLNRLLDA
YHWPGNIRQLEMVLRTALAMREPGETVLTLDHLPDSMLDELSASEKPQTGSIRENELEMI
RQSLDTHQGNVSAAADVLGISRATLYRKLKQLRS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactctaataaaaacaactgatcccaagtctcaccacgaagcccggctggcccgggaa
aaactccatctcgaagggcaggtcccggatggcgtgttgcgtgcggagatcgatgcttcg
tggcggcgcagcctgagccacggcgtgcatttcaatggcaagcatgagcttgcgctggaa
tcgagcgcgagtctcgatgtgttgctggcgagcaatcgcctgctgatcgatgcggcgatt
ccggccatcgattacctggccgaacgtcagggcaaggaaggcctgatcatcctcgccaat
tccgacgccaccattctcgcggtcgaaggacgtgccgaccggctcaagggcagcggcctg
caggacatcaccctcggcgcctgctggagcgaagccgcccgtggcaccaacgccctcggt
acggcgctggtggaagcgcggcccaccctgatcgattgcggcgaacactacctcgaccgc
ctcaccgatttttcctgcacctcggtgccgatccattgccctcagggtgaaatcctcggc
gtcctcgacctgacccgcgaaggcccgctcggccgcgttcacgacagcactgcactgctg
agcatggcggtcagccagatcgagagccgggtgttcaacaacagctttcccgatcagatc
gtcctcgcctttcacagccgtcggcagtatctggagtcgccgtggcaaggcttgttggca
gtcagtctcggcgggcagattctggcggtcagtgctcaggcctgccagttgctgcgggcc
gagcgttcggcactggtcggcaagcgctgtgaggaattcctcggggtcgatggcgtgcaa
ttgctgacccgtctgcaacagggcggcgtcggcagcgtacagaccgccaaaggcgaattt
ttctacaagaccctgcgagccccggcgcgctcggtcaacctcggcggcccgccacgcggc
gtggcgaaaaccgccaaggcgcaaccggatctggaagcactggccggcaacaacgcccgt
tatgcccgagccttgcgcatggcacgccaaggtctggccaatgagttgccggtactgttg
ctcggcgaaaccggcaccggtaaagaagtgatcgcccgcgcgttgcacctggccggcagt
cgcagcgacaaaccatttatagccgtgaactgcgcggcaattcccgaaggcctgatcgag
tctgaactgttcggctaccgcgaaggcgcgttcaccggatcgcgccgcggcgggatgatc
ggacgtctgcaacaagcccatggcggcacgttgttcctcgatgaaatcggcgacatgccg
ctggccctgcaggcgcgtctgctgcgcgttcttcaagatcgcaaagtcgcgccactgggg
gccggagaagagcaggacattgacgtcgcactgatctgcgccacgcaccgcgacctcaag
cgtcaggtcgaggacaagcaattccgcgaagatctgttctaccgggtcaacggcatcagc
gtgatgctcccggccctgcgtgagcgcgatgacttcgctgccctggtcactcgcctgctg
agcaaactcgacgcgccgaacgccgtgctgcacgacgacctcaatcgcctgctcgacgcg
tatcactggccgggcaatatccgccaactggaaatggtcttgcgcaccgctttggcgatg
cgcgaacccggtgaaaccgtactgaccctcgatcacttgccggacagcatgctcgacgaa
ctctccgccagtgagaagcctcagaccggcagtattcgcgaaaacgaactggagatgatc
cgccagtccctggacacccatcagggcaacgtctcggccgccgccgacgtcctgggcatc
agccgcgcgaccctgtatcgcaaactcaaacagttgcgctcgtga
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