Pseudomonas kribbensis: DLD99_21935
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Entry
DLD99_21935 CDS
T06348
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pke
Pseudomonas kribbensis
Pathway
pke02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DLD99_21935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pke03021
]
DLD99_21935
Transcription machinery [BR:
pke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DLD99_21935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
GerE
HTH_28
CEP70
DnaG_DnaB_bind
DUF4381
DUF2730
HTH_24
DUF6822
DUF7200
Motif
Other DBs
NCBI-ProteinID:
AXI63019
UniProt:
A0A345RUQ3
LinkDB
All DBs
Position
complement(4802259..4802804)
Genome browser
AA seq
181 aa
AA seq
DB search
MSGADASHRNHVNTLFRDHYQWLCTRLRRQSNDASSAEDIAAETFAQLLEAPGLTAIREP
RALLTTIAQRLLYERWRRGDLERRHLQQLQQSDLDHAPSPEDLADLSQSLKHLDRTLQRL
PGKVRSTFLLARIDGLTYPQIAAELGISQRSVSLYMTRSQALCNRHSANQTLISSQNKRS
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacgcatcccatcgcaatcatgtgaacacgttgtttcgcgaccattac
caatggttgtgcacacgcctgcgtcggcaatcgaacgatgcatccagtgccgaagacatc
gccgccgaaaccttcgcgcaactgctcgaagcaccaggcctgaccgccatccgcgaaccc
cgcgccttgctcaccaccatcgcccagcgcctgttgtatgaacgctggcggcggggcgat
ctggagcgtcggcacctgcaacaactgcagcagagtgatctcgatcacgcgccgtctccc
gaagatctggccgatctgtcgcagagcctcaaacacctggaccggacgctccagcgcctg
ccgggcaaggtgcgctcgacctttctgctggcgcgcatcgatggcctgacctacccgcaa
atcgccgccgaactgggtatctcccagcgttcggtgagcctgtacatgacccgttcccag
gccctgtgcaaccgccacagcgccaaccaaaccctgatttcctcccagaacaagaggtcc
gcatga
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integrated database retrieval system