KEGG   Pseudomonas kribbensis: DLD99_21935
Entry
DLD99_21935       CDS       T06348                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pke  Pseudomonas kribbensis
Pathway
pke02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pke00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DLD99_21935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pke03021]
    DLD99_21935
Transcription machinery [BR:pke03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DLD99_21935
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_23 Sigma70_r4 GerE HTH_28 CEP70 DnaG_DnaB_bind DUF4381 DUF2730 HTH_24 DUF6822 DUF7200
Other DBs
NCBI-ProteinID: AXI63019
UniProt: A0A345RUQ3
LinkDB
Position
complement(4802259..4802804)
AA seq 181 aa
MSGADASHRNHVNTLFRDHYQWLCTRLRRQSNDASSAEDIAAETFAQLLEAPGLTAIREP
RALLTTIAQRLLYERWRRGDLERRHLQQLQQSDLDHAPSPEDLADLSQSLKHLDRTLQRL
PGKVRSTFLLARIDGLTYPQIAAELGISQRSVSLYMTRSQALCNRHSANQTLISSQNKRS
A
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtccggcgccgacgcatcccatcgcaatcatgtgaacacgttgtttcgcgaccattac
caatggttgtgcacacgcctgcgtcggcaatcgaacgatgcatccagtgccgaagacatc
gccgccgaaaccttcgcgcaactgctcgaagcaccaggcctgaccgccatccgcgaaccc
cgcgccttgctcaccaccatcgcccagcgcctgttgtatgaacgctggcggcggggcgat
ctggagcgtcggcacctgcaacaactgcagcagagtgatctcgatcacgcgccgtctccc
gaagatctggccgatctgtcgcagagcctcaaacacctggaccggacgctccagcgcctg
ccgggcaaggtgcgctcgacctttctgctggcgcgcatcgatggcctgacctacccgcaa
atcgccgccgaactgggtatctcccagcgttcggtgagcctgtacatgacccgttcccag
gccctgtgcaaccgccacagcgccaaccaaaccctgatttcctcccagaacaagaggtcc
gcatga

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