Pseudomonas kribbensis: DLD99_21980
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Entry
DLD99_21980 CDS
T06348
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00061
Fatty acid biosynthesis
pke00071
Fatty acid degradation
pke01100
Metabolic pathways
pke01212
Fatty acid metabolism
pke02024
Quorum sensing
pke04146
Peroxisome
Module
pke_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DLD99_21980
00071 Fatty acid degradation
DLD99_21980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DLD99_21980
09145 Cellular community - prokaryotes
02024 Quorum sensing
DLD99_21980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pke01004
]
DLD99_21980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pke04147
]
DLD99_21980
Enzymes [BR:
pke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DLD99_21980
Lipid biosynthesis proteins [BR:
pke01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DLD99_21980
Exosome [BR:
pke04147
]
Exosomal proteins
Exosomal proteins of breast milk
DLD99_21980
Exosomal proteins of breast cancer cells
DLD99_21980
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AXI63028
UniProt:
A0A345RUR2
LinkDB
All DBs
Position
complement(4809952..4811640)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDANEFKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERQSA
AFAGYLQAHTDLAPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKMVPAYS
LPQAISFKSALRMGRGLGIKPLKVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLGQFGSDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIGGFI
KELKNWKFSALLGLNTLFVALMDHPDFKTLDFSTLKLTNSGGTALVKATAERWEQLTGCR
ITEGYGLTETSPVACTNPYGELSRIGTVGLPVPGTRLKVINDDGVEQPLGERGELCIKGP
QIMKGYWQKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggcgggcgtacccctggacatcgacgcg
aatgaattcaagtcggtgatcgaggtgttcgagcgttcctgcaagaaattcgctgaccgc
ccggcgttcagcaacatgggcgtgaccctgacctacgccgagctcgagcgccagagcgcc
gcgttcgccggttacctgcaagcccacactgatctggcgccgggggatcgcatcgcggtg
cagatgcccaacgtcctgcattatccgattgccgtgttcggtgccttgcgcgccgggctg
atcgtggtcaacaccaatccgctgtacaccgcgcgggagatgcgtcaccagttcaaggac
tccggtgcccgggcgctggtgtacctgaacatgttcggccagaaagtccaggaagtgctg
cctgacaccgacatccagtacctgatcgaagcgaagatgggcgacctgatgcccaccgcc
aagggctggctggtcaacaccgtggtcagcaaagtgaaaaaaatggtcccggcgtattca
ctgccccaggcgatttccttcaagagcgccttgcgcatgggccggggcctgggcatcaag
ccgttgaaggtcggcctggatgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctcacccacggcaatctggtggccaacatgcagcaggtgcgc
gcctgtcttggtcagttcggcagcgacggtcagccgttgttgcgcgaaggccaggaagtg
atgatcgcgccgctgccgctgtaccacatctatgctttcaccgcgaattgcatgtgcatg
atggtgtccggcaatcacaacgtgctgattaccaatccgcgggacatcggcggcttcatc
aaggagctgaagaactggaagttctcggcgctgctgggactcaacaccctgttcgtcgcg
ctgatggatcatccggacttcaagaccctggatttctctacgctcaaactcaccaactcc
ggcggcactgcgctggtcaaggctaccgccgagcgttgggagcagctcaccggttgccgc
atcaccgaaggttacggcctgaccgaaacctcgccggtggcctgcaccaacccgtacggc
gagctgtcgcgaatcggtacggtcggcctgccggtgccgggcacccgattgaaagtcatc
aatgacgacggcgtcgaacaacctttgggcgagcgcggcgaactgtgcatcaagggcccg
cagatcatgaagggctactggcagaaacccgaggccaccgccgaagtgctggatgccgag
ggctggttcaagtccggagacattgcggtgatcgacccggatggcttcgtgcgcatcgtc
gaccgcaagaaagacatgatcatcgtctccggtttcaacgtgtacccgaacgaaatcgaa
gacgtggtgatggcccatccgaaagtcgccaactgtgcggtgatcggtgtgccggacgag
cgttccggggaggcggtgaagctgtttgtggtggcgcgggaaaccggggtcagcctggaa
gagctgaaggcctactgcaaagagaatttcaccgcgtacaaggtgccgaagcacatcgtg
ctgcgtgagtcgctgccgatgacgcctgtcgggaagatcctgcggcgggagctgcgcgat
atcgcatag
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