Pseudomonas kribbensis: DLD99_24640
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Entry
DLD99_24640 CDS
T06348
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pke
Pseudomonas kribbensis
Pathway
pke02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DLD99_24640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pke02022
]
DLD99_24640
02035 Bacterial motility proteins [BR:
pke02035
]
DLD99_24640
Two-component system [BR:
pke02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DLD99_24640
Bacterial motility proteins [BR:
pke02035
]
Pilus system
Twitching motility proteins
DLD99_24640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
HTH_30
Pre_tape_measure
AAA_16
AAA_22
AAA
VpsR
Motif
Other DBs
NCBI-ProteinID:
AXI63526
UniProt:
A0A345RW60
LinkDB
All DBs
Position
5397100..5398446
Genome browser
AA seq
448 aa
AA seq
DB search
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLGEAQALLNRDTFDLCLTDMRL
PDGTGLELVQHIQQRYPQLPVAMITAYGSLETAINALKVGAFDFLTKPVDLTRLRELVAT
ALRMPATGGVCTSIDRRLLGDSLPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRASQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVDDKPGLFQAAHGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLDAEVAAERFRQDLYYRLN
VIELRVPSLRERRDDIEALASHVLKRLAHGTGQPAARLHPQALEALKNYRFPGNVRELEN
VLERAHTLCENRTIEADDLRLSEGNCAAEGGIADLTQIDNLEDYLENVERKLILQALEET
RWNRTAAAQRLNLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgagcccacggcaaaaaatcctcatcgtcgacgacgaaccggatatccgcgaa
ctcctggaaatcaccctgggacggatgaaactcgacaccttcagcgcacgcaacctcggc
gaagcccaggcgctgctgaaccgcgacaccttcgacctgtgcctgaccgacatgcgcctg
ccggacggcaccgggctggaactggtgcagcacattcagcaacgctacccacaattgccg
gtggcgatgatcaccgcctatggcagcctggaaacagcgatcaacgccctgaaagtcggg
gctttcgacttcctgaccaaaccggtggacctcacccgactgcgcgagctggtcgccacc
gcgttgcgcatgccggcgacgggcggcgtctgcacctctattgaccggcgcctgctcggt
gactcattgcccatgcgcaacctgcgcaagcagatcgataaactggcccgcagtcaggcg
ccggtctatatcagcggcgagtccggtagtggcaaggagctggtcgcccggctgattcac
gaacaaggcccgcgcgccagccaaccattcgtgccagtgaattgcggggcgattccttcg
gaactgatggagagcgagttcttcggtcaccgcaaaggcagtttcacgggtgcggtggac
gataagccgggcctgttccaggccgcccatggcgggacgctgtttctcgatgaagtggcg
gacttgccgctgtcgatgcaggtcaagctgctgcgggcaatccaggaaaaagccgtgcgc
agcgtcggcggccagcaggagaccgtggtcgatgtgcgtattctctgcgccactcacaag
gacctggacgccgaagtcgccgccgagcgctttcggcaggatctgtattaccggctgaac
gtgatcgaactgcgggtgccttctctgcgcgaacgtcgtgacgatatcgaggcattggcc
agccatgtgctcaagcgtctggcccatggcactggccagccggcggcgcgcctgcatcca
caagcgctggaggccttgaagaattatcgctttccgggaaatgtccgggagttggagaac
gtcctcgagcgcgcgcacaccctgtgcgaaaaccgcacgatcgaggccgacgacctgcgc
ctgagcgaaggcaattgcgcagccgagggcggcattgccgatctcacacagatcgacaac
ctcgaagactatctggaaaacgtcgagcgcaaactgatcctgcaggcgctggaggaaacc
cgctggaaccgtacggctgcggcccagcggttgaatctgtcattccgttcgatgcgctac
aggctcaagaagctcggcctggattaa
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