Pseudomonas kribbensis: DLD99_26465
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Entry
DLD99_26465 CDS
T06348
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pke
Pseudomonas kribbensis
Pathway
pke02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DLD99_26465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pke03021
]
DLD99_26465
Transcription machinery [BR:
pke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DLD99_26465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
HTH_17
HTH_3
Sigma70_ECF
PhyR_sigma-like
FaeA
HTH_31
Sigma70_r3
HTH_11
PCI
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AXI63864
UniProt:
A0A345RX48
LinkDB
All DBs
Position
5771590..5772108
Genome browser
AA seq
172 aa
AA seq
DB search
MSSAQSPHSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGREELLTPREP
RAFLVAIAKGLLFDYFRRAALEQAYLAELMLIPEGEQPSVEEQQLILEDLKAIDRMLGQL
STKARAAFLYNRLDGLTHAEIADKLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagcccaaagccctcacagtgagctcgtcggtgcgttgtatcgcgaccatcgc
ggctggctgctggcctggctgcggcgcaacgtggcttgtccgcaacgcgccgaagacctg
agtcaggacaccttcgtgcgcctgctcggtcgcgaggaactgctgacaccccgcgaaccc
cgggcgtttctggtggcgatcgccaaaggcctgctgttcgactacttccgtcgcgccgca
ctggagcaggcctatctcgccgaactgatgctgatccccgaaggcgagcagccgtcggtc
gaagaacagcaactgattctcgaagacctcaaagccatcgaccgaatgctcggccagctc
tcgaccaaggcccgcgctgcgttcctctataaccgtctcgatggcctgacccatgccgag
atcgccgacaaactcggcgtgtcggtgccgcgggtgcgccagtatctggcccagggtatc
cgccagtgctacatcgccctgtacggtgagccgacatga
DBGET
integrated database retrieval system