KEGG   Pseudomonas kribbensis: DLD99_26465
Entry
DLD99_26465       CDS       T06348                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pke  Pseudomonas kribbensis
Pathway
pke02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pke00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DLD99_26465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pke03021]
    DLD99_26465
Transcription machinery [BR:pke03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DLD99_26465
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_24 HTH_17 HTH_3 Sigma70_ECF PhyR_sigma-like FaeA HTH_31 Sigma70_r3 HTH_11 PCI HTH_5
Other DBs
NCBI-ProteinID: AXI63864
UniProt: A0A345RX48
LinkDB
Position
5771590..5772108
AA seq 172 aa
MSSAQSPHSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGREELLTPREP
RAFLVAIAKGLLFDYFRRAALEQAYLAELMLIPEGEQPSVEEQQLILEDLKAIDRMLGQL
STKARAAFLYNRLDGLTHAEIADKLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagcccaaagccctcacagtgagctcgtcggtgcgttgtatcgcgaccatcgc
ggctggctgctggcctggctgcggcgcaacgtggcttgtccgcaacgcgccgaagacctg
agtcaggacaccttcgtgcgcctgctcggtcgcgaggaactgctgacaccccgcgaaccc
cgggcgtttctggtggcgatcgccaaaggcctgctgttcgactacttccgtcgcgccgca
ctggagcaggcctatctcgccgaactgatgctgatccccgaaggcgagcagccgtcggtc
gaagaacagcaactgattctcgaagacctcaaagccatcgaccgaatgctcggccagctc
tcgaccaaggcccgcgctgcgttcctctataaccgtctcgatggcctgacccatgccgag
atcgccgacaaactcggcgtgtcggtgccgcgggtgcgccagtatctggcccagggtatc
cgccagtgctacatcgccctgtacggtgagccgacatga

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