Pseudomonas kribbensis: DLD99_26570
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Entry
DLD99_26570 CDS
T06348
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00260
Glycine, serine and threonine metabolism
pke00460
Cyanoamino acid metabolism
pke00630
Glyoxylate and dicarboxylate metabolism
pke00670
One carbon pool by folate
pke00680
Methane metabolism
pke01100
Metabolic pathways
pke01110
Biosynthesis of secondary metabolites
pke01120
Microbial metabolism in diverse environments
pke01200
Carbon metabolism
pke01230
Biosynthesis of amino acids
pke01240
Biosynthesis of cofactors
pke04981
Folate transport and metabolism
Module
pke_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DLD99_26570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DLD99_26570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DLD99_26570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DLD99_26570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DLD99_26570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DLD99_26570 (glyA)
Enzymes [BR:
pke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DLD99_26570 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AXI63885
UniProt:
A0A345RX69
LinkDB
All DBs
Position
complement(5794273..5795526)
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AA seq
417 aa
AA seq
DB search
MFSKQDRIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccggatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aaacgcgtgatggaagcgcaaggcagcggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaggtcgaagcgctggccatcgaa
cgcgccaagcaactgttcggcgccgattatgccaacgtccagccgcactccggttcttcg
gccaacagcgccgtgtacctggcactgatccaggcaggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtctcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaagaccggcctgatcgattacgacgaagtcgag
cgtctggccgtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactcgaaa
accctcgacttcccgcgcttccgtcagatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtggccggtctggtggctgccggtctgtacccgaacccgctgccgtac
gccgacgtggtcactaccaccacccacaagaccctgcgcggtccccgtggcggcctgatc
ctggccaaggccaacgaagagatcgagaagaagctcaacgccgcggtattccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctatcagcaacaagtgatcgacaacgcccaggcgatggcgagc
gtatttattaaacgtggctacgatgtagtgtccggcggcaccgacaaccatctgttcctg
gtcagcctgatccgtcagggcctcaccggtaaagacgcggacgccgcccttggtcgcgcc
cacatcaccgtcaacaagaacgccgtaccgaacgacccgcagtcgccgttcgtcacttcc
ggcctgcgcatcggcaccccggcggtgaccactcgcggcttcaaggtggcgcagtgcgtg
acactggctggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aacgtcgcccagcaggttgcggccctgtgcgcagacttcccggtttatcgctga
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