Pseudomonas kribbensis: DLD99_27375
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Entry
DLD99_27375 CDS
T06348
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pke
Pseudomonas kribbensis
Pathway
pke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLD99_27375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pke03019
]
DLD99_27375
Messenger RNA biogenesis [BR:
pke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DLD99_27375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AXI64044
UniProt:
A0A345RXM8
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Position
complement(5970302..5970781)
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPEETPEDALYRELNEEVGL
EREDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggatcattctgacgaatgacgccgga
caggtgctatgggctcgccgtatcaatcaagatgcctggcagtttccacagggaggaatc
aatcccgaggagacgccggaagacgccttgtaccgcgagttgaacgaagaagtgggcctg
gaacgcgaagatgttgaaattctcgcctgtacccggggctggttgcgctatcgtttgccg
caacgtctggtgcgaacccacagccaaccgctgtgcatcggccagaaacagaagtggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagctattggtatccgctgggccaggtggtgacattcaag
cgcgaggtgtatcgccgcgctctcaaagagcttgccccgcgccttttagcgcgcgactga
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