Pseudomonas kribbensis: DLD99_27730
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Entry
DLD99_27730 CDS
T06348
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pke
Pseudomonas kribbensis
Pathway
pke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLD99_27730 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pke03021
]
DLD99_27730 (rho)
03019 Messenger RNA biogenesis [BR:
pke03019
]
DLD99_27730 (rho)
Transcription machinery [BR:
pke03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DLD99_27730 (rho)
Messenger RNA biogenesis [BR:
pke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DLD99_27730 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
AXI64112
UniProt:
A0A345RXU6
LinkDB
All DBs
Position
complement(6043026..6044285)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPNVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NKSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLVDKLKTTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacag
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctgaaa
aagcacgctaaaagcggtgaggaaatctccggtgatggcgtgctggagattctccaggac
ggcttcggcttcctgcgctccgctgacgcttcctacctcgccggccctgacgacatctac
gtctcgccgagccagatccgccgtttcaacctgcgcaccggtgacaccatcgttggcaag
atccggccgccgaaggaaggcgagcgttatttcgccctgctcaaggtcgacacgatcaac
ttcgatcgccctgagaacgcgaagaacaagattctcttcgagaacctgaccccgctgttc
ccgaacgtgcgcatgaagatggaagccggcaacggttccaccgaagacctgaccggtcga
gtgatcgacctgtgcgccccgatcggcaaaggccagcgcggtctgatcgttgcaccgccg
aaagccggtaaaacgatcatgctgcagaacatcgcagcgaacatcgcccgtaacaatcct
gaagttcacctgatcgtgctgttgatcgacgaacgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggttgcctcgactttcgacgagccgccgacccgtcacgtg
caggttgctgaaatggtgatcgagaaggccaagcgcctggtcgaacacaagaaggacgtg
gtgatcctgctcgactccatcacccgtctggcccgtgcctacaacaccgtgattccgagc
tccggcaaggtgctgaccggtggtgtcgatgcccacgccctggagaagccgaagcgtttc
ttcggtgccgcgcgtaacatcgaagaaggcggctcgctgaccattatcgccaccgcgctg
gttgaaaccggctcgaagatggacgaagtgatctacgaagagttcaagggtaccggcaac
atggagctgcctctggaccgtcgcatcgccgagaagcgtgtgttcccggccatcaacatc
aacaagtccggcactcgccgtgaagagttgctgaccgccgacgacgaactgcagcgcatg
tggatcctgcgcaagctgctgcacccgatggacgaagtggcggccatcgagttcctggtc
gacaagctgaaaacgaccaagaccaacgacgaattcttcctgtcgatgaagcgcaagtaa
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