Pseudomonas kribbensis: DLD99_27945
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Entry
DLD99_27945 CDS
T06348
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00300
Lysine biosynthesis
pke00470
D-Amino acid metabolism
pke01100
Metabolic pathways
pke01110
Biosynthesis of secondary metabolites
pke01120
Microbial metabolism in diverse environments
pke01230
Biosynthesis of amino acids
Module
pke_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DLD99_27945 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DLD99_27945 (lysA)
Enzymes [BR:
pke01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DLD99_27945 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXI64152
UniProt:
A0A345RXY6
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Position
6084309..6085556
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AA seq
415 aa
AA seq
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MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARIGAGFDIVSRGELERVLAAGGSPDKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGIRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFLDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLVGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDTAARKYDVVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtggcggggaactgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggcacaccgacctacgtctactcccgcgcccacatcgaggcccag
tacctggcctatgccgatgcgctggccggcatgccgcacctggtgtgcttcgcggtcaag
gccaactccaacctcggcgttctgaatgtcctggcccgcatcggcgccggttttgacatc
gtttcccgtggcgagctggaacgcgtcctggccgccggcggcagccctgacaagatcgtg
ttctccggcgtcggcaagacccgtgacgacatgcgtcgcgcactggaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtcgccgccgagctg
ggcattcgtgcaccgatttccctgcgcgtgaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtacgtgcgtgccgcgcacctgccgaacctggaagtggtcggcgtggattgccacatc
ggttcgcaactgaccaccctgccaccgttcctcgatgcgctcgatcgcctgcttgatctg
gtggaccgcctgggcgattgcggcatccacctgcgccacatcgatctcggtggtggcctg
ggtgtgcgttaccgcgatgaagagccgccattggccgccgattacatcaaggccgtgcgc
gagcgtctggtcggtcgtgacctggcgctggtgttcgaaccgggccgcttcatcgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaagacttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggccctgtaccaggcgtggatg
gacgtgacggcggtcaagccgcgcgacaccgctgcacgcaagtacgacgtggtcggcccg
atctgcgagaccggcgatttcctcgccaaggatcgcgaactggcgctggaagaaggcgac
ctgctggccgtgcattcggccggggcctacggttttgtgatgagctccaactacaacact
cgcggccgtgccgccgaagtgctggtagatggcgatcaggtatttgaagtgcgtcgccgc
gagaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa
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