Pseudomonas kribbensis: DLD99_28350
Help
Entry
DLD99_28350 CDS
T06348
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pke
Pseudomonas kribbensis
Pathway
pke02025
Biofilm formation - Pseudomonas aeruginosa
pke03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DLD99_28350 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DLD99_28350 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pke02044
]
DLD99_28350 (clpV)
Secretion system [BR:
pke02044
]
Type VI secretion system
Imp/Vas secretion system core components
DLD99_28350 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
NACHT
AAA_7
TniB
nSTAND3
Clp_N
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_24
AAA_25
Hpr_kinase_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AXI64230
UniProt:
A0A345RY64
LinkDB
All DBs
Position
complement(6171110..6173767)
Genome browser
AA seq
885 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLMLGLLERPNGLLSRALQDA
DVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTSVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQPQAAANGKPAAQGESLLERFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALEALEARLDEAETEMVALETLWTEQKQLAER
LLELRQQLAKAREAAAVEPVVNVEEDAEGTVIETVAAEVEEGQSVEALEAQLNETHSALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCEDGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFSWCQNLVDHLSERCTQSESGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGEASVTCEFA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgcgat
ctggagcgttcggccgagcgctgcgtcgcccgtggcggcagcaagattctggtcgaagac
ctgatgctcggtctgctggagcgcccgaacggtctgctctcccgtgcgttgcaggatgcc
gacgttgatgccggcgaactgagcgccgcgctgcaatcgcgggtcgagcacagcgcttcg
cgcaacccggtgttcgccccggagctggtgcaatggctgcaggacgcgctgctggtggcc
aaccttgaactgggccagacctcggtggaagacgcggcgctgatcctcgcgctgctgcgc
aacccgatgcgctacgccggcagccgctaccagccgttgctcgccaagttgaacattgat
cgcctgaaagaatttgccctgtcgcaacagcctcaggcagcggccaacggcaaaccggcc
gctcagggcgaatcgctgctggagcgcttcacccacaacctgacccaacaggcccgcgac
ggcaaactcgacccggtgctgtgccgcgatggcgcgatccgccagatggtcgacatcctc
gcccgtcgccgcaagaacaacccgatcgtggtcggtgaggccggtgtcggtaaaaccgcc
atcgtcgaaggcctcgcctcgcgcatcgctgccggtgaagtgccgcaggtcttgaaaggc
gttgaactgttgtcgctggacatgggcctgttgcaggccggcgccagcgtcaaaggtgaa
ttcgaacgtcgtctgaaaggcgtgatcgacgaggtcaaagcctcaccgaaaccgatcatc
ctgttcatcgatgaagcccacaccctgatcggcgcgggcggcaatgccggcggttccgac
gcggccaacctgctgaaaccggcgctggcccgtggcgaactgcgcaccatcgccgccacc
acctgggccgagtacaagaaatacttcgagaaagacccggcgctggcccgtcgtttccag
ccggttcagttgcacgaaccgaccgtgagcgaagcggtgaccatcctccgtggcctggct
caggtctacgagaagagccacggcatctacctgcgcgatgacgcggtggtttcggcagcg
gaactgtccgcccgttacctggccggtcgccaactgccggacaaggccgtcgatgtgctc
gacaccgcctgcgcccgcgtacgcatcagcctcgccgccgccccggaaagcctggaacgc
ctgcgtggcgaactggctgaaggtggccgtcagcgtcaggccctccgtcgcgatgccgaa
gccggtctgctgatcgaccacgaagcgctggaggcactggaagcgcgtctggacgaagcc
gaaaccgaaatggtcgcactggaaaccctgtggaccgagcagaaacaactggccgagcgt
ctgttggaactgcgtcagcaactggccaaggcccgtgaagcggcggcggtcgagccggtg
gtcaacgttgaggaagacgccgaaggcacggtgatcgaaaccgttgctgctgaagttgaa
gaaggccaaagcgtcgaagcgctggaagcccagctcaacgaaacccacagcgccctgacc
gccgctcaggtcaaggagcgtctggtcagcttcgaagtctgcccgcgtctggtggccgaa
gtgatcagcgcctggaccggtgtgccgctggcgcaactggcccgcgaacacaacgccaag
gtcgcaagcttcgccactgacctgcgcacccgcatccgtggtcaggaacaagccgtgcac
gcgctggatcgctcgatgcgtgccaccgctgccggcctgaacaagcctgacgcaccggtc
ggcgtgttcctgctggtgggcccgagcggcgtcggcaagaccgaaaccgctctggcactt
gccgacctgctgtacggcggcgaccgtttcatcaccaccatcaacatgtccgagttccag
gagaagcacaccgtttcccgcctgatcggtgcaccgccaggctacgtcggttacggcgag
ggcggcatgctcaccgaagcggtgcgccagaagccgtactcggtggtgctgctcgatgaa
gtcgagaaggccgacccggacgtgctcaacctgttctaccaaatcttcgacaaaggcgtg
gccaacgacggcgaagggcgcgagatcgacttccgcaacacgctgatcctgatgacctcg
aacctgggcagcgacaagatcagcgacctctgcgaagacggcgcgcggccaaccgccgaa
gtgctggaagaaaccattcgcccggtgctcagcaaacacttcaaaccggcgctgctggcg
cggatgaaagtggtgccttactacccggtcggtggcccggtgctgcgcgagctgatcgag
atcaaactcggtcgtctgggcgagcgcctgaaccgtcgtcagctggatttcagctggtgc
cagaacctcgtcgatcacctgtccgagcgctgcacccagagcgaaagcggtgcgcgcctg
atcgaccatttgctcgaccagcacgtgctgccgctggtggccgaccgcttgctcgacgcc
atggccaccggtgaaagcctcaagcgtgtgcatgcgacgctcgatggtgaagccagcgtg
acctgcgagttcgcctga
DBGET
integrated database retrieval system
