KEGG   Pseudomonas kribbensis: DLD99_28660
Entry
DLD99_28660       CDS       T06348                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pke  Pseudomonas kribbensis
Pathway
pke03420  Nucleotide excision repair
pke03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DLD99_28660
   03430 Mismatch repair
    DLD99_28660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pke03400]
    DLD99_28660
Enzymes [BR:pke01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DLD99_28660
DNA repair and recombination proteins [BR:pke03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DLD99_28660
   MMR (mismatch excision repair)
    Other MMR factors
     DLD99_28660
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 AAA_22 RHH_1
Other DBs
NCBI-ProteinID: AXI64290
UniProt: A0A345RYC4
LinkDB
Position
6245815..6247998
AA seq 727 aa
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLYLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMSGSNLFSGSEIPDTGLSLGQAVRHSIFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggctcccgttggtcgtcaattggtcctggccggtgccggctcaggcaagacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgtcaccgcatcgagcaattgctg
gggatcaacccggccggcatgtgggtcggcacgttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaagcaggcttgagccagaccttccagattctcgacagcgatgac
cagcaacgtctggttaagcgggtgatccgcgagctggggctggacgaacagcgctggccg
gcccgtcaggcccagtggttcatcaacgggcagaaagacgaaggtctgcgtccgcagcac
attcaggccagcggcgatctgtacctggccaccatgcgcggcatctacgaggcctacgag
gcggcctgccagcgcgccggcgtcatcgatttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgaccatccgggcctgctggcccactaccagaagcgtttccgccacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctgggcaag
ggtggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacattcaccagtattcttccgacttcccggattccgagaccatccgt
ctggagcagaactaccgctccaccgccggcatcctgaaagccgccaacgccctgatcgcc
aacaacaccgggcgtctgggcaaggagctgtggaccgacggtggcgacggcgaagcaatc
aacctgtacgccgcgttcaacgaacacgatgaagcacgctacgttgtcgaaaccatcgaa
agcgcgctgaaaaccggcctggcccgcagcgatatcgcgattctctaccgctccaacgcc
caatcccgcgttctggaagaagccttgctgcgcgagcgcattccctaccgcatctatggt
ggccaacgcttcttcgagcgggctgaaatcaaaaacgccatggcctacctgcgtttgctg
gaaggtcgcggcaacgatgcggcgctggagcgggtgatcaacgttccggctcgcggcatc
ggcgaaaaaaccgtcgaagccatccgtgaacatgcgcgccacagcgatgtgtcgatgtgg
gaagccatgcgccagctggtggccaacaagggcctgaccggtcgtgcggccggcgccctc
ggcgcgttcatcgagctgatcgagaacctcgccgccaagtgcgccgagatgccgttgcac
ctgatgacccagactgtcatcgagcaatccgggctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgagaacaccgaagaagacgaagacctgacaccgctggcggcgttcctcggccacgcg
tcgctggaggccggtgacactcaggctgatgagcacgaagacagcattcagttgatgacc
ctgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaaccgggacgtcttgaagaggagcgtcgtctg
gcttacgtcggcatcacccgggcgatgcagaacctggtgatgacctacgctgaaacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgattcgtacgggaagtgccgaaa
ggcctgattcaggaagtgcggctgtcgaacagcgtcagccgaccgttcggcggcaaccag
tcgatgagcggcagcaacctgttcagcggcagcgagatcccggataccggcctgagcctc
ggccaggctgtgcggcactcgatctttggcgacggcgtgatcctcaacttcgaaggcgcc
ggggctcaggcacgggtgcaagtgaacttcagtgaaggcagcaagtggctgatgctgggt
tacgcgaagctggaagccatctaa

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