Paraburkholderia kirstenboschensis: RW095_02230
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Entry
RW095_02230 CDS
T09457
Name
(GenBank) SIS domain-containing protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkf03000
]
RW095_02230
Transcription factors [BR:
pkf03000
]
Prokaryotic type
Helix-turn-helix
Other families
RW095_02230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_AsnC-type
TetR_N
HTH_IclR
LacI
Motif
Other DBs
NCBI-ProteinID:
WOD14328
LinkDB
All DBs
Position
3:complement(443182..444114)
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AA seq
310 aa
AA seq
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MDILQVVPHSTTDTLARIRAISQFLPEAQLQVGKAILAEPEWSVRASVAEIAQRAGVSAP
TVVRFCRAVGFEGLSDFKLQLAQSLAVGTPYLHRAVNAQDGVPSLIHKILYAAAAVLTSL
ESQLDADTINLAIEKLAAANRIECYSVGNVSTFLATDAQSRFARLGLMSNAYFDPHMQVI
SAASLSPRDVVLAISHVGRMPTLLEAVAIAREQGATVIGITQPDTPLARQCTIPIGMVVP
EDAAARVGTEAYIAGQVLLEVLMVGMGLRLGPSALQRLKRVRSVLRERGVDSDVHPALQR
ALSEADPGPQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctgcaagtcgtcccgcactccactactgacaccctcgcgagaatccgggca
atttcccagtttttgcctgaggcgcagctccaggtcggaaaggcaatactcgccgagccg
gagtggtcagtgcgggccagtgtcgccgagatcgcgcagcgcgcgggggtgagcgcgccc
accgtcgttcgcttctgccgtgccgtcggcttcgagggcctgagcgacttcaagctgcag
cttgcacaaagcctggcagtgggcactccgtaccttcatcgggcggtgaacgcccaggac
ggcgtgcccagtctgatccacaagatcttgtacgcagcggccgctgtgttgaccagcctc
gaaagtcaactcgacgcagacacaatcaacctggccatcgagaagctcgcggccgccaac
cggatcgagtgctacagcgttggcaacgtatcgaccttcctcgccactgacgctcaatcg
cgcttcgcccggcttggtctcatgtcgaatgcctatttcgatccgcacatgcaggtcata
tcggccgcctcgctctctccccgcgacgtcgtgctcgcaatctcgcacgtcggtcgcatg
cccaccttgcttgaggcggtggcgatcgcgcgcgagcagggtgcgacggtgatcggtatc
actcaacccgatacgccgctcgccaggcaatgcaccattccgatcgggatggtcgtgccc
gaagatgccgccgcacgcgtgggcacggaggcctacatcgcgggtcaggtgctcctcgag
gtcctgatggttggcatgggtctgcggcttgggccctcggccctccagcgcctcaagcga
gtgcggtcggtgctgagagagcgcggcgtcgacagcgacgtccatccggcgctgcaacga
gcattgtcagaggcggatcccggtcctcagtaa
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