Paraburkholderia kirstenboschensis: RW095_04300
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Entry
RW095_04300 CDS
T09457
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RW095_04300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkf02000
]
RW095_04300
Transporters [BR:
pkf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RW095_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
CBM_2
Motif
Other DBs
NCBI-ProteinID:
WOD14640
LinkDB
All DBs
Position
3:complement(856183..857679)
Genome browser
AA seq
498 aa
AA seq
DB search
MRRMLIAAALALSASAAMAQTTIRIGLQDDIGSLDPARSVQFVDRIVFASLCNSLVDVAP
DLKIVPMLATSWTTGDDGKSLTFKLRQGVKFQDDEPFNAAAVKANLDRYRTLPTSNRKSE
LSSVDHVDVIDDSTVKIVLKQPDAALLATLSDRAGMMLAPKTLSDAAGVASHPVCSGPYK
FVQRVQNDRVVLEKFAGYWDADKYPVQRVVFQPIPDSTVRLANLRSGSLDMLERLAPSDV
AAVKSDANLQFKPVTGLGFYYVTFNINNGPRGNGPLKDKRVRQAFELSIDRDAIDQVIGA
GIFPPANQGIPKSSPYYNASLPTPKRDVAKAKALLKAAGQEHPTIEFAYPNNTVASQITQ
MLQAMLSETGITLKLRPSDYATELNAGHTGDFEAMYTGWSGRLDPDGNLHQFNTCAGNLN
YAHYCNQQVDSLLDSARTKQTQAERKSDYDAAGKILADDDPIVYIYAQPWPFVLSKKVQG
FTPYADGLVRLRGVSIKG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaatgttgattgccgcggcgctcgcattgagcgcttccgccgcgatggcgcag
accaccatccgcatcggcctgcaggacgatatcggctcgctcgacccggcccgcagcgtg
cagtttgtcgaccggatcgtgttcgcgtcgctatgcaattcgctcgtcgacgtcgcgccc
gatctgaaaatcgtgccgatgctcgccacgtcatggaccacgggcgacgacggaaaatcg
ctgacgttcaagctgcgccagggggtcaagttccaggacgacgagccgttcaacgccgcc
gccgtgaaggcgaacctcgaccgctaccgcacgctgccgaccagcaaccgcaagagcgaa
ttgtcttccgtcgatcatgtcgatgtgatcgacgacagcaccgtgaaaatcgtgctgaag
cagccggacgccgcgctgctcgccacgctgtcggaccgcgcgggcatgatgctcgcgccg
aaaacgcttagcgacgcggcaggcgtcgcgtcgcatcccgtgtgctcggggccgtacaag
ttcgtgcagcgcgtgcagaacgatcgcgtggtgctcgagaagttcgccggttactgggac
gcggacaagtatcccgtccagcgcgtcgtgttccagccgattcccgacagcaccgtgcgt
ctcgcgaatctgcgctcgggctcgctggatatgctggagcgtctcgcgccgtccgacgtc
gccgccgtcaagagcgatgcgaacctgcagttcaagccggtgacgggtctcggcttctac
tacgtgacgttcaacattaacaacggcccgcgcggcaacggtccgctgaaggacaagcgc
gtgcgccaggcgttcgagctgtcgatcgaccgcgatgcgatcgaccaggtgatcggtgcg
ggcatcttcccgcccgcgaaccagggcattccgaaatcgagcccgtactacaacgcgtcg
ctgccgaccccgaagcgcgacgtcgcgaaggcgaaggcgctgctgaaggcggcgggccag
gagcatccgaccattgaattcgcgtatccgaacaacacggtcgcgagccagatcacgcag
atgctgcaggccatgctcagcgaaacgggcatcacgctgaagctgcgtccgagcgactac
gcgacggaactgaacgcaggccacaccggcgacttcgaagcgatgtacacgggctggtcg
gggcgcctcgatcccgacggcaacctgcatcagttcaacacctgcgcgggcaacctgaac
tacgcgcactactgcaaccagcaggtcgattcgctgctcgattcggcgcgcaccaagcag
acccaggccgagcgcaagtccgactacgacgccgcgggtaagatcctcgccgacgacgat
cccatcgtctatatctacgcgcagccctggccgttcgtgctgtcgaagaaagtgcagggc
ttcacgccttacgccgacggtctggtgcgcctgcgcggcgtgtcgatcaagggctga
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