Paraburkholderia kirstenboschensis: RW095_04465
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Entry
RW095_04465 CDS
T09457
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RW095_04465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkf02000
]
RW095_04465
Transporters [BR:
pkf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RW095_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Man-6-P_recep
Motif
Other DBs
NCBI-ProteinID:
WOD14667
LinkDB
All DBs
Position
3:complement(891954..895151)
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AA seq
1065 aa
AA seq
DB search
MNISRLFILRPVATLLVVIALVLVGIVAMRFLPVSSLPDVDYPTIQVQTFYPGASPDVMA
TTVTAPLEVQLGEIPGLQQMVSYSSEGASVITLQFDLSLSLDVAEQDVQQAINAANSFLP
SGLPAPPTYAKVNPADQPILTLAVTSKSMPLTQLQDVANNRLGSKISEVPGVGLVTTAGG
NVPAVRVEADPHKLAGYGLNIDDLRTLLANVNISQPKGNFDGPELDYTINGNDQISDPKD
YLDTVIAYQNGAPVFLRDVAHVSTAPQDVERGAWINHTPAILLNVQRQPGANVIATVNQI
KKQLPALESTLPAGMQVSVVSDSTGVIRSSVSDAAVELILAIALVVMVIFVFLRNLPSTI
IPSISVPVSLIGTLAVMYELHYSIDNLSLMALIIATGFVVDDSIVMIENIVRYLEEGMNP
LEAALAGAGEIGFTILSLTVSLIAVLIPLLFMGGVIGRLFSEFAATLAVTIVISGVVSLT
LVPMLCARILRAKVQRHPSAFERISEGIFNRTLNVYERGLRWVLRHQTLTLVIALAAMAL
TVMLYIAIPKGLFPVQDVGVIQGISVADNSVSYDAMVNRQAKLADAILKDPDVTSITSYV
GIDGINTTLNNGRFLINLRPHDQRSLSALQIARRLQDEGAQVPGIRLYLRPEQDLTLDTT
VSPNRYSLALRGPSQQAFSQVVPELMAKMKQISSITDVQSDEDSKGLSVDVEVNRQLAAR
YGITPATIDNVLYDSLGQRIVSTIFEQSDQYRVILVAKPQSMPNVESLGDLYLPSQTSSA
GQVPLREIAKIRLTKSPLSINHLAQFPVVTISFNLASGASLSTAVAEIRKAEQEIALPPS
ITPSFQGAAAAFEDSLSSEVYLLIAALVAVYIVLGVLYESFVHPVTILSTLPSAGIGALL
ALMIAGSDLDVIGIIGIVLLIGIVKKNAIMIVDFALAAERQQGKSPADAVFEASLLRFRP
ILMTTLAAMLGALPMLVGTGTGSELRRPLGLAIIGGLTFSQILTLFTTPVIYLFFDRMAG
RLRRRRGRDHVRDDGQNGEAGNSTNGGRERGPDDGPGGAATEPTS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcccgtctattcattctgcggccggtcgccaccctgctggtggtgatcgcg
ctcgtgctggtgggcatcgtcgcgatgcgctttctgcccgtgtcgtcgttgcccgatgtc
gactatccgaccatccaggtacaaacgttctatccgggtgcgagcccggacgtgatggcc
accaccgtgaccgcgccgctcgaggtccaactgggagaaatccccggtttgcagcagatg
gtctcgtacagctcggaaggcgcgtcggtcattacgttgcagttcgacctttcgctaagc
ctcgacgttgccgagcaggacgtgcaacaggcgatcaacgcggccaacagttttctgccg
agcggattgcccgcaccgcccacatacgctaaggttaaccccgctgaccagccgattctc
acgcttgccgtgacgtcgaagtcgatgccgcttacccagttgcaggacgtcgcgaacaat
cggctcggttcgaagatttcggaggtgccaggcgtcggtcttgtcacgacggcgggcggc
aacgtgccggcggttcgagtggaggcggacccgcacaagcttgccgggtacggtctgaat
atcgacgacctgcgtacgctgctcgccaacgtgaatatcagccagccgaaaggcaatttc
gacgggccggagctggattacacgatcaatggcaacgaccagatcagcgacccgaaagac
tatctcgacactgtcattgcgtatcagaatggtgcaccggtcttcctgcgcgatgtcgcg
catgtgtcgactgctccgcaggacgtcgagcgcggtgcatggatcaaccacacgccggcg
atcctgctgaacgtgcagcgccagcccggcgcaaacgtgatcgccacggtcaaccagatc
aagaagcagttgcccgcgcttgaatcgacgctgccggccggtatgcaggtcagcgtggtg
tcggacagcactggggtgatccgttcgtcggtatccgatgcggcagtcgagctgatactc
gccatcgcgctggtggtgatggtgatcttcgtgttcttgcgcaacctcccctcgacgatc
atccccagcatctcggtgcccgtctcgctgatcggcacgcttgcggtgatgtacgaactg
cattactcgatcgacaacttgtcgctgatggcgctgatcatcgcaacgggtttcgtcgtc
gacgattcgatcgtgatgatcgagaacatcgttcgctacctcgaagaggggatgaacccg
ctggaagcggcattggcgggagccggcgaaatcggctttacgatcctgtcgctgaccgta
tcgcttatcgcggtgctgattccgctgctgttcatgggtggcgtgattggccggctgttc
agtgagttcgcggccacgctggctgtcaccatcgtcatttccggggtggtgtcgctgacg
ctggtgccgatgctgtgtgcccgaatccttcgcgcgaaggtgcaacgccatccgagtgct
ttcgagcggatcagcgagggcatcttcaaccgcacgctgaatgtctatgagcgcggattg
cgctgggtgctccgccatcagacgctcacgctggtcatcgcgctagcggcgatggcgctc
acggtcatgctgtatatcgccattccgaagggtctctttccagtgcaggacgtgggtgtc
atccagggcatcagcgtggcggacaactcggtgtcgtatgacgcgatggtgaaccgccag
gcgaagctggctgacgcgatcctgaaggatcccgacgtcacatcgattacgtcgtatgtc
ggcatcgacgggatcaacacgacgctgaacaacggccgcttcctgatcaacctgcgcccg
cacgaccagcgctcgctgagcgcattgcagattgcacgccggctgcaggacgaaggggcg
caagtgcccggcatccggctctatctgcggccggagcaagacctcacgctcgatacgacg
gtatcgccgaaccggtacagcttggcgttgcgcgggccgagccagcaggcgttcagccag
gttgtgccagagctgatggcgaagatgaagcagatttcatcgatcacggacgtacagagc
gatgaggacagcaagggtctgagcgttgacgtcgaggtgaatcggcagttggcggcgcgc
tacggcatcacgcctgcaacgatcgacaatgtgttgtacgactcgctcgggcagcgcatt
gtgtcgaccatcttcgagcagtcggaccagtaccgcgtgatcctcgtggccaagccccag
tcgatgccgaatgtcgagtccctcggcgacctgtacctgccgagccagaccagcagcgcg
ggccaagtcccgctacgcgagatcgcgaaaatccgcctgacgaaatcgccactgtcgatt
aaccatctcgcgcagttcccggtcgtgacaatctcgttcaatctggcgagcggcgcgtcg
ctcagcaccgcagtggccgagatccgcaaggcagagcaggagatcgctttgccgccgtcg
atcacgccgtcgttccaaggcgcggcggcagccttcgaggactcgctgtcgagcgaggtc
tatctgctgattgccgcattggttgccgtgtacattgtgcttggcgtgctttacgagagc
ttcgtccatccggtcacgatcctttcgacgctcccgtcagccggcattggtgcgctgctt
gcgctgatgattgcgggcagcgatctggatgtgatcgggattatcggcattgtgctgctg
atcgggatcgtgaaaaagaatgcgatcatgatcgtcgacttcgcactggcggccgagcgg
cagcagggcaagtcgccggctgacgcggtcttcgaggcgtcgttgctcaggttccgtcca
atcctgatgacgacgctcgctgcgatgctgggcgcattgccgatgctcgtgggcaccggc
acgggctcggagctgcgccggccgctgggtcttgcaatcatcggcggccttacgttcagc
cagatcctgacgctgttcaccacgccggtgatctatctgttcttcgaccggatggctggg
cgcctgcgccgacgccgtggtcgtgatcatgttcgcgacgatgggcaaaacggtgaggca
ggaaacagcacgaacggcggccgcgagcgaggccctgacgacggcccgggcggggccgcc
acggagcccacgtcgtga
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