Paraburkholderia kirstenboschensis: RW095_04535
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Entry
RW095_04535 CDS
T09457
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RW095_04535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkf03000
]
RW095_04535
Transcription factors [BR:
pkf03000
]
Prokaryotic type
Helix-turn-helix
Other families
RW095_04535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
Mg_chelatase
AAA
AAA_16
AAA_2
AAA_22
nSTAND3
DUF815
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WOD13334
LinkDB
All DBs
Position
3:complement(908046..909686)
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AA seq
546 aa
AA seq
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MQTRSDASAGSESAGYWREHEMLLLQQVMALVGKSLSPAPALREMLHLMSELLGLNRGRI
VLADETRRSGRIRYAYGLTPEEIGRGVYAYGEGITGRALQHGQLTIIQDIDREPDFLART
VERSRLPDGPVSFIALPIVVERLTVGVLACHRIRHRSRALADDITVLRILATLAGQLLQL
EAGLEEKTRALEEQNAVLARALESAAARYGIVGTSPPLLRAISELERVSDSAASVLLLGE
SGTGKELFARALHLASSRRDRAFIKINCAAIPDTLFESELFGYERGAFTGANSMRAGWFE
QASKGTLFLDEIGELPLMMQAKLLRTLQEGTITRLGGKAEIQVDVRLVAATNCDLQRDVT
RGTFRQDLYYRLNVIPIHLPSLAERRQDIRVLALHFISHTNQLNQRNVNLTAAALDRLEE
YSWPGNIRELTNFIERVVLLAEKPLLDAADIDRLLPSHAADEPDVAPASAESAAANRGQG
ASSHDPVTHTVPLPMRPYRRVSSHPAQALVDALEQCGGNKSRAAQQLGMTARQFSYRWQK
LGLPND
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacgatctgacgcctcagccggcagcgaatccgccggctactggcgcgaacac
gaaatgctgctattgcagcaggtaatggcgcttgtcggcaaaagcctgtcccccgcgcct
gcgctgcgcgagatgctgcatctgatgtccgagctgctcggcctgaaccgcggccgcatc
gtgctcgcggacgaaacgcgtcgaagcgggcgcatccggtacgcgtacggactgacccct
gaggaaatcggccggggtgtgtatgcgtatggtgaaggcatcaccgggcgcgcgctgcag
cacggccaactgacgatcatccaggacatcgaccgcgaaccggattttctggcgcgaacg
gttgagcgctcacggttgccggacggcccggtctcgttcatcgcgctgccgatcgtcgtc
gaacggctgacggtcggcgttctagcgtgtcaccgcattcgccaccgctcgcgtgcgctg
gccgacgacatcacggtgttgcggattctcgcgacactggccggacagttgctgcaactg
gaagccggcctcgaggaaaaaacccgcgcgctcgaagagcagaacgcagtgctcgcgcgg
gccctcgaatcggcggctgcccgctacggaatcgtcggcacctcgccgcctttgctgcgc
gcgatctcggaactggagcgcgtatcggattccgccgcgagcgtgctgttgctcggcgag
tcaggcaccggcaaggagttgtttgcaagagccttgcatctggcgagttcgcggcgcgac
cgtgctttcatcaagatcaactgcgcggcgataccggatacgctgttcgagtccgagctg
ttcgggtacgaacgcggcgccttcacgggcgcgaacagcatgcgcgcgggctggttcgag
caggccagcaaaggcacgctgtttctcgacgagatcggcgagctgccgctgatgatgcag
gccaagctactgcgcacgctgcaggaagggaccattacgcgtctcggtggcaaggcggag
atccaggtcgacgtgcgcctcgtcgcggccaccaattgcgatttgcaacgcgatgtgacg
cgcggcaccttccgccaggacctgtactaccggctcaacgtgattccgatccacctgccg
tcgctcgctgaacgccgccaggacattcgcgtccttgcgctgcatttcatcagtcatacg
aatcaactcaaccagcgcaacgtcaatctcaccgcggccgcgctggatcggctcgaagag
tattcgtggcccggcaatatccgcgagctgaccaatttcatcgagcgggtcgtgttgctg
gcggagaagccgctgctcgatgcagcggatatcgaccggctgttgccttcacacgcggcg
gatgagccggatgttgcgcccgcgtctgcagagtcggcggccgccaaccgtgggcagggc
gcttcatcgcatgatcccgtgacccacacggtgccgctgccaatgcgtccttaccggcgt
gtcagttcgcacccggcgcaggcgcttgtcgacgcgctcgaacagtgcgggggaaataaa
tcgcgcgcggcgcaacagctcggcatgacagcgcgccagttcagctatcgctggcaaaaa
cttggcctgccgaatgattga
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