Paraburkholderia kirstenboschensis: RW095_04960
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Entry
RW095_04960 CDS
T09457
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RW095_04960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkf02000
]
RW095_04960
Transporters [BR:
pkf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RW095_04960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
RsgA_GTPase
TOBE_3
TOBE
Rad17
nSTAND1
AAA_25
AAA_29
AAA_28
AAA
AAA_30
AAA_22
AAA_18
NACHT
AAA_16
ORC-CDC6-like
Mg_chelatase
AAA_5
SbcC_Walker_B
AAA_23
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOD13394
UniProt:
A0ABZ0EA56
LinkDB
All DBs
Position
3:994322..995509
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AA seq
395 aa
AA seq
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MSTPHTVVSQSKHSAAGAQLAASQARTSQTGAAVQMRGIRHRFAAVPVIEDVTLEIAAGE
LVALLGPSGCGKSTLLRILAGLQVQSEGEVHIGGQRVDGLAPRQRGVGIVFQNYALFPHM
TVAANVAYGLEANGVARRDAARKALQMLEMVRMEAFAKRYPRELSGGQQQRVALARTLAV
EPRILLLDEPFAALDKNLRLDMQIEIRRLQRELNITTVMVTHDQEEAMSMADRVAVLNRG
RLEQYDPAVAIYDQPATPFVATFVGTANLLPVTLRVHGDQCLATFDDGAVLTVAEPGPWR
DAGAALLAVRPEQWAWQLPQPGASARQLLATVQLAMPIGPTLVVDLQTDAGQTVKISVPR
AEGADLRPGMRVALDFKPGARVRTFKAAQPSTAGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccgcacactgtcgtttcacagtcgaagcacagcgcagcgggcgcccaactt
gcagcttcgcaggcacgcacctcgcaaaccggtgccgccgtgcagatgcgcggcatccgg
catcgtttcgccgccgtgccggtgatcgaagacgtcacacttgaaattgccgcaggcgaa
ctggttgcgttgctcggcccgtcgggctgtggcaagagcactttgttgcgcatccttgcc
ggtctgcaagtgcagtccgagggcgaagtgcatatcggcgggcaacgcgtggacggcctt
gcgccacgccagcgcggcgtgggcattgtcttccagaactacgcgctgtttccgcacatg
acggtcgccgccaacgtcgcctacggtctggaagccaacggcgtcgcgcgtcgtgatgcc
gctcgcaaggcgctgcagatgctcgagatggtgcgcatggaagcatttgcgaaacgctat
ccgcgcgagttgtcgggcggtcagcagcaacgcgtggcactggcccgtacgcttgccgtc
gagccgcgcatcctgctgctcgacgagccttttgcggcgctggacaaaaacctgcggctc
gatatgcagatcgaaatccgccgtctgcagcgcgaattgaacatcacgaccgtgatggtg
acgcacgatcaggaagaggccatgagcatggccgaccgggtcgcggtgctcaatcgcggg
cggctcgaacaatacgacccggcggtcgcgatctacgatcagcccgcaacccccttcgtc
gccaccttcgtcggcacggcgaatctgctgccggtcaccttgcgcgtgcacggcgaccag
tgcctggcaaccttcgacgatggcgccgtgctgaccgttgctgagcccggcccgtggcgc
gacgccggcgcggcgctgctggcggttcgccccgagcaatgggcgtggcagttgccgcag
cccggcgccagcgcgcgtcagctactggctacagtgcaactggcgatgccgatcggtccc
acgctggtggtcgatctgcagaccgatgccggacagaccgtgaagatttccgtgccgcgc
gcagagggtgccgacttgcgcccgggcatgcgcgtcgcgctcgatttcaagccgggtgcg
cgggtgcgcacgttcaaggcggcgcaacccagtaccgcaggtgtttag
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